Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq8 176 5e-39 >seq8 Length=1964072 Score = 176 bits (194), Expect = 5e-39 Identities = 512/788 (65%), Gaps = 4/788 (1%) Strand=Plus/Minus Query 47961 ATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAA 48020 |||||||| | || | || ||| | ||||| ||||| || ||||||||||| ||| Sbjct 141077 ATAGTACCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAA 141018 Query 48021 GGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATA 48080 || |||| || || | || | || | ||||| | ||||| | |||||| ||| Sbjct 141017 GGATTTCCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGATA 140958 Query 48081 ACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCA 48140 | | | || | | | ||||| | ||| | ||| || || || ||| Sbjct 140957 GTCTTGCGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCA 140898 Query 48141 TACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTT 48200 || |||| | || || |||||||| || || ||||| | | ||| || ||| ||| Sbjct 140897 TAAACATCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTTT 140838 Query 48201 TTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTT 48260 | || | ||||||||| ||| || ||||| | || || | ||| | | | Sbjct 140837 TCAACACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGA 140778 Query 48261 AGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCAT 48320 | |||||| |||||| |||| | || |||||||| || | | |||||||||||| Sbjct 140777 ACTTCTTCCTTGCCATGATTCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCAT 140718 Query 48321 GGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTG 48380 ||||| | || || || | |||| ||||| |||||||| |||||||| | ||||||| Sbjct 140717 GGTTCAAGGTAAATAGCGAAAGCACCAGGTCGCTTATTACCACCTTGATCAACATATCTG 140658 Query 48381 GCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCC 48440 || || ||||| |||||| | ||| |||||||| || || || | || ||||| || Sbjct 140657 GCGGTGTTGTTGAAAACTCGGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCG 140598 Query 48441 GAAATATAACTTCCACTAGCTCTTATATTACTAA--TTGAAATACCTATACCACCTGCCA 48498 | || || ||| |||| | || | || ||| | ||| |||||||| || Sbjct 140597 GCGATGTATGCACCAGTAGCACGGATTCTGTGAACGTTG--AGACCAATACCACCGGCAT 140540 Query 48499 TTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTA 48558 | || || || | ||||| || | || || ||||| || || ||||| || || Sbjct 140539 TCTTCGAAATCATGGCACAAATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCT 140480 Query 48559 TCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATG 48618 |||| | | || || || || | ||| | || |||||| | | || | || Sbjct 140479 TCATGTCGATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTG 140420 Query 48619 TTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAAT 48678 | || || ||||| | || | || | ||| | ||| || ||||| || ||| || | Sbjct 140419 TCGGGGAGGCATGGGTGAAGTACTTGTTTGACATCAAGTTGTATGTCTCGATAGCACTCT 140360 Query 48679 CTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAA 48738 | ||||| ||| ||||| | | |||||||| | ||| | ||| || | ||| Sbjct 140359 CAATATCATCACCATGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTG 140300 Query 48739 CAATTTTG 48746 ||| |||| Sbjct 140299 CAACTTTG 140292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562105251688200