Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq8 176 5e-39
>seq8
Length=1964072
Score = 176 bits (194), Expect = 5e-39
Identities = 512/788 (65%), Gaps = 4/788 (1%)
Strand=Plus/Minus
Query 47961 ATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAA 48020
|||||||| | || | || ||| | ||||| ||||| || ||||||||||| |||
Sbjct 141077 ATAGTACCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAA 141018
Query 48021 GGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATA 48080
|| |||| || || | || | || | ||||| | ||||| | |||||| |||
Sbjct 141017 GGATTTCCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGATA 140958
Query 48081 ACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCA 48140
| | | || | | | ||||| | ||| | ||| || || || |||
Sbjct 140957 GTCTTGCGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCA 140898
Query 48141 TACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTT 48200
|| |||| | || || |||||||| || || ||||| | | ||| || ||| |||
Sbjct 140897 TAAACATCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTTT 140838
Query 48201 TTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTT 48260
| || | ||||||||| ||| || ||||| | || || | ||| | | |
Sbjct 140837 TCAACACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGA 140778
Query 48261 AGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCAT 48320
| |||||| |||||| |||| | || |||||||| || | | ||||||||||||
Sbjct 140777 ACTTCTTCCTTGCCATGATTCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCAT 140718
Query 48321 GGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTG 48380
||||| | || || || | |||| ||||| |||||||| |||||||| | |||||||
Sbjct 140717 GGTTCAAGGTAAATAGCGAAAGCACCAGGTCGCTTATTACCACCTTGATCAACATATCTG 140658
Query 48381 GCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCC 48440
|| || ||||| |||||| | ||| |||||||| || || || | || ||||| ||
Sbjct 140657 GCGGTGTTGTTGAAAACTCGGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCG 140598
Query 48441 GAAATATAACTTCCACTAGCTCTTATATTACTAA--TTGAAATACCTATACCACCTGCCA 48498
| || || ||| |||| | || | || ||| | ||| |||||||| ||
Sbjct 140597 GCGATGTATGCACCAGTAGCACGGATTCTGTGAACGTTG--AGACCAATACCACCGGCAT 140540
Query 48499 TTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTA 48558
| || || || | ||||| || | || || ||||| || || ||||| || ||
Sbjct 140539 TCTTCGAAATCATGGCACAAATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCT 140480
Query 48559 TCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATG 48618
|||| | | || || || || | ||| | || |||||| | | || | ||
Sbjct 140479 TCATGTCGATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTG 140420
Query 48619 TTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAAT 48678
| || || ||||| | || | || | ||| | ||| || ||||| || ||| || |
Sbjct 140419 TCGGGGAGGCATGGGTGAAGTACTTGTTTGACATCAAGTTGTATGTCTCGATAGCACTCT 140360
Query 48679 CTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAA 48738
| ||||| ||| ||||| | | |||||||| | ||| | ||| || | |||
Sbjct 140359 CAATATCATCACCATGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTG 140300
Query 48739 CAATTTTG 48746
||| ||||
Sbjct 140299 CAACTTTG 140292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562105251688200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |