Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq27 170 2e-36
seq2 109 4e-18
seq60 91.5 1e-12
>seq27
Length=788475
Score = 170 bits (188), Expect = 2e-36
Identities = 400/596 (67%), Gaps = 7/596 (1%)
Strand=Plus/Minus
Query 549989 GTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGT 550048
|||| ||| ||||| ||||| || ||||| || |||||| ||| | | | ||| |
Sbjct 606482 GTAG-TATTGGTATCGATTTGGGTACCACCTACTCTTGTGTGGGTATCTTCCGTGATGAT 606424
Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108
| | | |||||||| ||||| || ||||| ||| | || || ||||| | ||| |||||
Sbjct 606423 AGAATCGAAATTATCGCCAACGACCAAGGAAACCGTACCACCCCATCCTTCGTTGCTTTC 606364
Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168
|| || || || | | | | || ||||| || || |||||| | | || || | |
Sbjct 606363 ACAGATACCGAGCGTCTGATCGGAGATGCCGCCAAGAATCAAGTCGCCATGAACCCAATC 606304
Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGACTGTTCA 550227
|| || | || |||||||| ||||| ||||| | ||||| | ||| | |||||
Sbjct 606303 AACACCGTCTTCGATGCTAAGCGTTTGATTGGTCGCAAGTTCGCA-GATGCTGAGGTTCA 606245
Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287
|| ||||||||||| | || ||| | | || | | |||||| || || ||
Sbjct 606244 AGCCGATATGAAGCACTTCCCATTCAAGGTCATTGACCGTGGTGGAAAGCCAGTCATCGA 606185
Query 550288 AG-CTACTCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTT 550345
| | | | | |||| | || ||||| |||||||| |||| || || ||| |
Sbjct 606184 GGTCGAGT--TCAAGGGCGAGAACAAGCAATTCACACCAGAAGAAATCTCTTCCATGATC 606127
Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405
|| | || |||| | | || || |||| | ||| | |||| | || ||
Sbjct 606126 TTGGTCAAGATGAGAGAGACTGCTGAGGCTTACCTCGGTGGAACTGTTAACAACGCTGTC 606067
Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465
| || || ||||| || || | || |||||||||||||| ||||| || ||||| |
Sbjct 606066 GTCACAGTCCCAGCTTACTTCACCGATTCACAACGTCAAGCCACTAAGGACGCTGGTCTC 606007
Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525
|||||||| ||||| ||||| ||||| ||||| || ||||| || ||||| |||| ||
Sbjct 606006 ATTGCTGGTCTTAACGTTCTCCGTATCATCAACGAGCCTACCGCAGCTGCCATTGCTTAC 605947
Query 550526 GGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581
|| | || || | | ||| || | ||| || |||||||| ||| ||| ||
Sbjct 605946 GGTTTGGACAAGAAGATTGAGGGTGAGCGTAACGTTCTCATCTTCGATCTTGGTGG 605891
>seq2
Length=2834403
Score = 109 bits (120), Expect = 4e-18
Identities = 118/155 (76%), Gaps = 1/155 (1%)
Strand=Plus/Minus
Query 550379 GTTGGTCAAGAAGTTA-CGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACA 550437
||||| ||||||| | | | ||||| || ||||| ||||| || || || ||| ||
Sbjct 2396276 GTTGGGCAAGAAGGTCTCAAAGGCAGTCATCACTGTCCCAGCCTACTTCAACGACAACCA 2396217
Query 550438 ACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAA 550497
|||||||||||| || |||||||| ||||| || ||||| || || ||||| |||||
Sbjct 2396216 ACGTCAAGCTACCAAGGATGCTGGTGCCATTGCCGGTCTTAACGTCCTCCGTATCATCAA 2396157
Query 550498 TGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532
|| ||||| |||||||| |||| || || ||||
Sbjct 2396156 CGAGCCTACCGCTGCTGCCATTGCTTACGGTCTTG 2396122
>seq60
Length=53878
Score = 91.5 bits (100), Expect = 1e-12
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || | ||||| || ||||| || || || || ||||||||||||||||| ||||
Sbjct 27939 ATGCCGTCGTTACTGTTCCCGCATACTTCAACGATTCCCAACGTCAAGCTACTAAGGATG 27880
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| | ||||| || | || || || | || ||||||| || ||||||||||| |
Sbjct 27879 CTGGTCAAATTGCCGGTTTGAACGTCCTCAGAGTTGTCAATGAGCCAACTGCTGCTGCTC 27820
Query 550518 TTGCATATGG 550527
| || || ||
Sbjct 27819 TCGCTTACGG 27810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029269293322450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |