Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq27 131 1e-25 seq1 89.7 4e-13 >seq27 Length=788475 Score = 131 bits (144), Expect = 1e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || |||||||| || || || || |||||||| |||| || || | |||| || Sbjct 515981 ACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGACCATCCTCA 515922 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||| || || || |||||||||||||||||||| || || || || |||||||| Sbjct 515921 AGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACCCTCCTTATCTTGG 515862 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||| || ||| | || | |||||||| | ||| |||||||| |||| || || Sbjct 515861 ATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACTTCAAGGGTGATGGTCTTT 515802 Query 101441 CCGGTTAAAGTTTTTACAAATA 101462 ||||| | || || |||| || Sbjct 515801 CCGGTGAGGGTCTTGACAACTA 515780 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| | ||||||||| ||||| || ||||| || | | || | | |||| || Sbjct 516209 ACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCA 516150 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||||| ||||| || | |||||||||||| || ||||| || || ||||||||| Sbjct 516149 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGA 516090 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| ||| | || | || || || | || || || | ||||| || || Sbjct 516089 ATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTT 516030 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || || || || ||||| Sbjct 516029 CCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || ||||| || ||||| || ||||| || | || | |||| || | ||| Sbjct 515693 ATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAAGTTG 515634 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || |||||||||||||| ||||| ||||| || || |||||||| || || Sbjct 515633 CTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTTATCTTGGATCTT 515574 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || || | || | || || | ||| || ||||| |||| || ||||| || Sbjct 515573 TGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATAGTCTTGCCAGT 515514 >seq1 Length=6243313 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 ||||| || |||||||| | || ||| | | || || | |||||| || || || ||| Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 ||||| ||||||||||| ||||| || || || || || || || || ||| | || Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | |||||||| | || || ||||| |||| || ||||| || Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 2454611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275961030285