Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq27 127 2e-24 seq17 87.8 1e-12 >seq27 Length=788475 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || |||||||| |||||||| |||||||| || || ||| Sbjct 516446 AGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTG 516387 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||||||||| || ||||| |||| ||| ||||| || | |||| |||||| Sbjct 516386 CCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCC 516327 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || ||||||| || || || | |||| Sbjct 516326 TTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTA 516267 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || || ||||| || ||||| Sbjct 516266 ATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||||| || || ||||| || ||||| || || | | || | || || Sbjct 516209 ACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCA 516150 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||| ||||| || || ||||||||||| | |||| |||||||| || | Sbjct 516149 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGA 516090 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | || || | ||| ||||||| || || || ||| Sbjct 516089 ATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTT 516030 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || || || || ||||| Sbjct 516029 CCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 >seq17 Length=1064257 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || || ||| ||| ||||| || ||||| || || ||| | || Sbjct 789768 AGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGG 789709 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || || || |||| ||||||||| || | || | |||||| Sbjct 789708 CCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCC 789649 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||| ||||| | || Sbjct 789648 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTG 789589 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| | || || || || |||||||| Sbjct 789588 ATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935255448115