Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 141 2e-28 >seq3 Length=2715537 Score = 141 bits (156), Expect = 2e-28 Identities = 345/517 (67%), Gaps = 13/517 (3%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || ||||| ||||| || ||||| || || || |||| |||||||||||| Sbjct 2405379 TGGTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATGTTCTCC 2405438 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACA----CCCGTGTCAGGCCCATCTGTTCCAG 47955 ||||| ||| ||||||| | | || | | ||| | || | | | || Sbjct 2405439 ATGAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGC---CCAAAGCGATG-AG 2405494 Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 || |||| || ||| |||||||||||| |||||| | ||||||||||| ||| Sbjct 2405495 AAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGCGTTCATGCCTAAGAG 2405554 Query 48016 GGACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | ||| | || ||||| || | || || | ||| || | |||||||| | | Sbjct 2405555 AG-CACATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGATGA 2405613 Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 | | |||| || || || || || | | | || | |||| | ||| | Sbjct 2405614 CATCTTGAACGGCTTGCTTGGATGGGCGGT---GCTTGAGATGGGAAAAGAGGAGGCATG 2405670 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||| | |||||||| ||| |||||| |||||||||| || || | Sbjct 2405671 CGAAGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGG 2405730 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 ||||| || | || ||||||||||| || | ||||| || || |||||||| || | Sbjct 2405731 CCATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATAC 2405790 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 | || || || ||||| ||| ||| | | | || | || |||||||||| |||| Sbjct 2405791 CTTCAACGGCAGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGTTCTTGTCTTGAATCC 2405850 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 | | |||||||| |||||||| || ||||| || Sbjct 2405851 ACTTGACAGCCCAGTCGGCCTTCTTTTTAATGCAAGG 2405887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526919699200