Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 111 3e-19 seq8 107 4e-18 >seq3 Length=2715537 Score = 111 bits (122), Expect = 3e-19 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGAGCGCTACGTTT 25872 |||| || | |||||| ||||| | |||||||| ||| | | ||| | |||| ||| Sbjct 2405883 GCATTAAAAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGA-CAAGAACTCTACCTTT 2405825 Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 | | || || || || || ||||| || || || || || ||| ||| || || || Sbjct 2405824 GCTCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCA 2405765 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCT 25991 | ||||||||||||||| || || |||| |||| || |||||| |||||||| || Sbjct 2405764 TCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACT-TACTTTCTCCAACGAACT 2405706 Query 25992 CATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 |||| | | ||||| |||||||||| || || || ||||| |||| Sbjct 2405705 CATCTCCCGTGACGAAGGTCTCCACACCGACTTCGCATGCCTCCTCT 2405659 Score = 86.0 bits (94), Expect = 1e-11 Identities = 160/233 (69%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || ||||||||| |||||||| ||| || Sbjct 2406282 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATCGATTTG 2406223 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATT--TTC-TCAAG 25593 | ||||| | ||| |||| || | ||| || || ||| | ||| || | Sbjct 2406222 TCAAAGGATCTTCACGACTGGAACAACAGACTCAATGATGATGAGCGCTACTTCATCTCG 2406163 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | |||||||| ||||| ||||| || || || || ||||| || ||| || Sbjct 2406162 CACGTTCTCGCATTCTTCGCAGCATCTGACGGAATTGTCAATGAGAACTTGGTAGAGCGA 2406103 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | ||||| || | ||||| | || |||||||||||||| || Sbjct 2406102 TTCAGTGGTGAAGTTCAAATCCCAGAGGCAAGATGCTTCTACGGTTTCCAAAT 2406050 >seq8 Length=1964072 Score = 107 bits (118), Expect = 4e-18 Identities = 291/439 (66%), Gaps = 10/439 (2%) Strand=Plus/Minus Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTC 222013 || |||| ||| || || | || ||| || ||||| | ||| ||||| ||| || Sbjct 140912 TCGAACTCTTCGCCATAAACATCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAGTC 140853 Query 222014 CAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073 || | || | || || | || ||| || || || || ||||||| || | ||| Sbjct 140852 CACTCTCCATTCTTTTCAACACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGAAG 140793 Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133 ||||| | | || || ||| ||| | || || | |||||| | |||||| ||| Sbjct 140792 AGATCACGTGCACGAACTTCTTCCTTGCCATGATTCTTGCGCAGATCAAGAAACTCGAAA 140733 Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCC 222193 | |||||| ||||| || || || || | || | ||| || |||||||| || ||||| Sbjct 140732 ACGTCAGCATGCCATGGTTCAAGGTAAATAGCGAAAGCACCAGGTCGCTTATTACCACCT 140673 Query 222194 TGATCCACCATCCTCTC-CAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGG 222251 ||||| || || ||| | | | |||||| | || || | || || | ||||||| Sbjct 140672 TGATCAAC-ATA-TCTGGCGGTGTTGTTGAAAACTCGGAGCATAGGGACAATGCCGTTGG 140615 Query 222252 ATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG- 222310 | ||||||||||| ||||| ||||| || | || | ||| | || Sbjct 140614 AGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAGCAC---GGATTCTGTGAACGTTGA 140558 Query 222311 --CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368 || ||||||||||| | ||||| |||||||| || |||| | |||||| || | Sbjct 140557 GACCAATACCACCGGCATTCTTCGAAATCATGGCACAAATCTTCAAAGTGTCGTAAATAC 140498 Query 222369 CCTCCATAGAGTCCTCCTT 222387 | || ||| ||||||||| Sbjct 140497 CATCAATACTGTCCTCCTT 140479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838936667200