Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq27 168 4e-36 seq1 102 5e-16 seq60 93.3 3e-13 seq2 86.0 4e-11 >seq27 Length=788475 Score = 168 bits (186), Expect = 4e-36 Identities = 369/548 (67%), Gaps = 6/548 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| ||||| || || || ||| |||||| | | | | | ||| || | | Sbjct 606477 ATTGGTATCGATTTGGGTACCACCTACTCTTGTGTGGGTATCTTCCGTGATGATAGAATC 606418 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || ||||| |||||||| || | || || ||||| | ||| |||| || || Sbjct 606417 GAAATTATCGCCAACGACCAAGGAAACCGTACCACCCCATCCTTCGTTGCTTTCACAGAT 606358 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | ||| || |||||||| || || |||||| || || || | || || Sbjct 606357 ACCGAGCGTCTGATCGGAGATGCCGCCAAGAATCAAGTCGCCATGAACCCAATCAACACC 606298 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || |||||||| | ||||||||||| || || | ||| | || ||| | ||| Sbjct 606297 GTCTTCGATGCTAAGCGTTTGATTGGTCGCAAGTTCGCAGATGCTGAGGTTCAAGCCGAT 606238 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAA 474629 ||| || | || || ||||| || | |||||| || ||| || || | | Sbjct 606237 ATGAAGCACTTCCCATTCAAGGTCATTGACCGTGGTGGAAAGCCAGTCATCGAGGTCGAG 606178 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || || | || ||||| |||| ||| |||| ||||| ||| | || | || Sbjct 606177 TTCAAG--GGCGAGAACAAGCAATTCACACCAGAAGAAATCTCTTCCATGATCTTGGTCA 606120 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 | |||| | | || || ||| | || || || | || | | || || | || Sbjct 606119 AGATGAGAGAGACTGCTGAG-GCTTACCTCGGTGGAACTGTTAACAACGCTGTCGTCACA 606061 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || ||||| || || | ||||| ||||||||||| ||||| || || || ||||| Sbjct 606060 GTCCCAGCTTACTTCACCGATTCACAACGTCAAGCCACTAAGGACGCTGGTCTCATTGCT 606001 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 |||||||| ||| | ||||| || || || || || ||||| || ||||||| ||| | Sbjct 606000 GGTCTTAACGTTCTCCGTATCATCAACGAGCCTACCGCAGCTGCCATTGCTTACGGTTTG 605941 Query 474869 GATAAGAA 474876 || ||||| Sbjct 605940 GACAAGAA 605933 Score = 131 bits (144), Expect = 1e-24 Identities = 441/681 (65%), Gaps = 17/681 (2%) Strand=Plus/Minus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 ||||| | |||||||| || ||||||||||| |||| ||||| | ||||||| || Sbjct 605364 CGTCTCCGCACTGCTTGCGAGCGTGCTAAGCGTACTCTCTCTTCCTCCGCTCAAACCTCT 605305 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 | || |||| ||||| || || || || |||| | || || || | ||| Sbjct 605304 ATCGAGATTGACTCTCTCTTCGAGGGTATCGATTTCTACACATCCATCACCCGTGCTCGT 605245 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || || || |||| || ||||| | || | | || || || | || ||| Sbjct 605244 TTCGAGGAACTTTGCCAGGACCTCTTCCGTTCCACCACTACCCCAGTCGACCGTGTCCTC 605185 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 ||| | || | |||||||| |||||| || ||||| || || || ||||| || Sbjct 605184 GCTGATGCCAAGATCGACAAATCTAGAGTCCACGAGATTGTCCTCGTTGGTGGTTCTACC 605125 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCA-----TATTTTAATGGTAAAAAGTTAA 475781 | || ||| || ||| ||| ||||| || || || ||||| || || Sbjct 605124 CGTATCCCACGTATTC---AAAAGCT--CATCACCGATTACTTCAACGGTAAGGAGCCAA 605070 Query 475782 ATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTAT 475839 | |||| | || |||||||| ||||||||||| || ||||| ||||| || || || Sbjct 605069 AC--AAGTCCATCAACCCTGATGAGGCTGTTGCATACGGTGCTGCCGTCCAGGCTGCCAT 605012 Query 475840 TTTATCAGGTCAATCAGACGAGAAA-CTA--AATAATATTGTACTTGTTGACGTAACTCC 475896 | | || ||| | | | || ||| || | || | ||| | || || | || Sbjct 605011 TCTCTCTGGTGACACTTCCTCCAAGTCTACCAACGAGATCCTCCTTCTCGATGTCGCCCC 604952 Query 475897 ACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATAC 475956 | | || | ||| | || || | ||| || ||||| || || ||| ||||| || Sbjct 604951 ATTGTCTCTTGGTATCGAGACTGCTGGTGGACAAATGACCAAGCTCATTCCAAGAAACAC 604892 Query 475957 TCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGT 476016 | | |||||| ||| || || | || || ||||| | || || || ||| || ||| Sbjct 604891 TACCATCCCAACCAAGAAGTCTGAGGTCTTCTCCACCTTCTCAGACAACCAACCAGGTGT 604832 Query 476017 AACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAAC 476076 ||||||| |||| || ||||| | || ||| || || || ||| | || | Sbjct 604831 CCTCATCCAAGTCTTCGAGGGTGAGCGTCAACGCACCAAGGACAACAACCTTTTGGGCAA 604772 Query 476077 TTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTT 476136 || | ||| ||||| || ||||| || | || |||||||||||||| || || || Sbjct 604771 ATTCGAGCTTACTGGTATCCCACCTGCACCACGTGGTGTTCCTCAAATTGAGGTCACATT 604712 Query 476137 TGATATTGATGCAAATGGTAT 476157 ||| ||||||| || || || Sbjct 604711 CGATCTTGATGCCAACGGAAT 604691 Score = 113 bits (124), Expect = 3e-19 Identities = 119/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| || ||||| Sbjct 516156 ATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTT 516097 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||||||||||| ||||||| || || ||||| | || | || | ||| || | Sbjct 516096 ATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAA-AGTGA 516038 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || | ||||||||||| ||||| Sbjct 516037 TGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTG 516004 Score = 93.3 bits (102), Expect = 3e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| |||||||||||||| || ||||| | ||| |||||||| || || || || ||||| Sbjct 515928 ATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACCCTCCTT 515869 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||||| |||||| |||||| || || || |||| | ||||||||| || Sbjct 515868 ATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACTTCAAGGGTGAT 515809 Query 480737 AGTTTTACCGGTGAGAGTCTTAAC 480760 || || |||||||| ||||| || Sbjct 515808 GGTCTTTCCGGTGAGGGTCTTGAC 515785 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || || || || || || || ||||| | || || Sbjct 516450 ACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGT 516391 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| || || | |||||||| ||||| || | |||||||| ||||| ||||| || Sbjct 516390 TCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACC 516331 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| || ||||| ||||| ||||||||||| | | ||| | Sbjct 516330 CTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAA 516271 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || ||||| || | ||||| || || ||||| Sbjct 516270 CGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTG 516232 Score = 91.5 bits (100), Expect = 1e-12 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| |||||||| || ||| || || || || || ||| | || Sbjct 515711 ACGAAGGCGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGT 515652 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| |||||||||||||| || ||||| | ||| ||||| || || |||||||| Sbjct 515651 GCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCC 515592 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||| ||||| |||||| ||||| ||||| ||||| || | ||||| Sbjct 515591 CTCCTTATCTTGGATCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAG 515532 Query 480731 GGTAATAGTTTTACCGGT 480748 ||| ||||| || || || Sbjct 515531 GGTGATAGTCTTGCCAGT 515514 >seq1 Length=6243313 Score = 102 bits (112), Expect = 5e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || ||||||||||||||||| || || | |||||||||||| ||||||||||| |||||| Sbjct 2454741 TCCTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTG 2454682 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 || || ||||| |||||| ||||| || |||| | |||||||| || Sbjct 2454681 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCGACCTCAAGGGTGATG 2454622 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAA 480763 || || || || || ||||| ||||| Sbjct 2454621 GTCTTGCCCGTAAGGGTCTTGACGAA 2454596 >seq60 Length=53878 Score = 93.3 bits (102), Expect = 3e-13 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||||||||| ||||| || || ||||| ||||||||||| ||||| |||| Sbjct 27939 ATGCCGTCGTTACTGTTCCCGCATACTTCAACGATTCCCAACGTCAAGCTACTAAGGATG 27880 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||||| ||| | || || | | || | ||||| ||||| || || || | Sbjct 27879 CTGGTCAAATTGCCGGTTTGAACGTCCTCAGAGTTGTCAATGAGCCAACTGCTGCTGCTC 27820 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACAA 474885 | ||||| ||| | || ||| || ||||| Sbjct 27819 TCGCTTACGGTTTGGAGAAGGATGAGGACAA 27789 >seq2 Length=2834403 Score = 86.0 bits (94), Expect = 4e-11 Identities = 112/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 474717 TTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAA 474775 |||| ||||||| | | | ||||| || ||||| ||||| || || || || ||| Sbjct 2396275 TTGGGCAAGAAGGTCTCAAAGGCAGTCATCACTGTCCCAGCCTACTTCAACGACAACCAA 2396216 Query 474776 CGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAAT 474835 |||||||| || || ||||| || ||||| |||||||| || | ||||| || || Sbjct 2396215 CGTCAAGCTACCAAGGATGCTGGTGCCATTGCCGGTCTTAACGTCCTCCGTATCATCAAC 2396156 Query 474836 GAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 || || || || || || ||||||| ||||||| Sbjct 2396155 GAGCCTACCGCTGCTGCCATTGCTTACGGTCTTG 2396122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268157538099740