Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 >seq3 Length=2715537 Score = 127 bits (140), Expect = 2e-24 Identities = 204/293 (70%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 139248 GCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCG 139307 ||||| || | ||||| |||| |||||||| ||||||||||| || ||| || || Sbjct 2344312 GCTATCGCCTTAAGTCCTTCTGGTCCATGATAAACTGCATAGAATGCACTCATGTTGGCC 2344253 Query 139308 AGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCT 139367 | || |||||| || || || | ||||| || || || ||||| | ||| || || ||| Sbjct 2344252 AACAATGCTTGAGCCGTACACACATTACTAGTAGCCTTTTCTCTGCGAATGTGTTGTTCT 2344193 Query 139368 CTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACA 139427 |||||||| | ||| ||||| ||| || ||| ||||| || ||| | Sbjct 2344192 CTAGTTTGCAATGCCAATCTCATTGCTTTATCCCCTAACCTGTCTTTCGATATACCGATG 2344133 Query 139428 ATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGA 139487 | | || || ||||||||||||||||| || | |||||||| |||||||| ||| Sbjct 2344132 AGACGTCCGGGAATCTTTCTCTTATACTTATCACTAACAGCAAAGAAAGCAGCATGTGGA 2344073 Query 139488 CCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 || || || || | |||| ||||| | || | | || | ||||||||| Sbjct 2344072 CCGCCATAGCCAAATGGAACTCCAAAACGCTGAGCATTTCCAAAAGCAATATC 2344020 Score = 116 bits (128), Expect = 4e-21 Identities = 181/257 (70%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGT--TTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCAT 138219 ||||||| ||||| |||| |||||||| ||||| || || || || |||||||||| Sbjct 2345467 AATGGTGCCAGATGGGATTTG--ACACCAATTGGACCAACACCTGGTCCACCACCTCCAT 2345410 Query 138220 GTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATG 138279 | ||||||||||| ||||| || | || ||||| |||||||| |||||| |||| | Sbjct 2345409 GAGGAATACAGAACGTCTTGTGAAGGTTAAGATGGCATACATCGGCACCAATCTCACCAG 2345350 Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339 || || || | || || || | || || ||||| | ||||| |||||||||| Sbjct 2345349 GTGAACATAATCCGATTTGAGCGTTCATGTTGGCGCCATCCATGTATACTTGACCACCAT 2345290 Query 138340 TGTCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATG 138399 | ||||| || | |||| | ||| | || || || |||||| || || Sbjct 2345289 GCTGGTGAACAATGTCACATGCAGCTTTGACTTCTGGCTCGAACACACCAAAGGTACTTG 2345230 Query 138400 GATATGTAATCATAATA 138416 ||||||| ||||| ||| Sbjct 2345229 GATATGTGATCATGATA 2345213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578994745072600