Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq27 102 1e-16 seq17 86.0 1e-11 >seq27 Length=788475 Score = 102 bits (112), Expect = 1e-16 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | ||||| |||| ||| || |||| || || || || Sbjct 516236 ATTTGCATACCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTG 516177 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || ||||| | ||| || | || || || ||||| || | | ||||||| Sbjct 516176 TAGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGA 516117 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || || || || |||||||| || || | ||| | ||| || ||||| || Sbjct 516116 TCAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGAT 516057 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || | ||| || || || || || | || || || || |||||||| Sbjct 516056 GACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 >seq17 Length=1064257 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || |||||||| | || | ||| || | ||| ||||| || || || |||| | Sbjct 789732 ATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGC 789673 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || ||||| || || || || || |||| || | ||| || || Sbjct 789672 TGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTG 789613 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || ||||||||||| || || || || ||||| || || || || || || || || ||| Sbjct 789612 TCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGC 789553 Query 193359 AT 193360 || Sbjct 789552 AT 789551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648720931600