Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq27 102 1e-16
seq17 86.0 1e-11
>seq27
Length=788475
Score = 102 bits (112), Expect = 1e-16
Identities = 164/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | ||||| |||| ||| || |||| || || || ||
Sbjct 516236 ATTTGCATACCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTG 516177
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || ||||| | ||| || | || || || ||||| || | | |||||||
Sbjct 516176 TAGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGA 516117
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
||||| || || || || |||||||| || || | ||| | ||| || ||||| ||
Sbjct 516116 TCAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGAT 516057
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || | ||| || || || || || | || || || || ||||||||
Sbjct 516056 GACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001
>seq17
Length=1064257
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || |||||||| | || | ||| || | ||| ||||| || || || |||| |
Sbjct 789732 ATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGC 789673
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| || || || ||||| || || || || || |||| || | ||| || ||
Sbjct 789672 TGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTG 789613
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| ||||||||||| || || || || ||||| || || || || || || || || |||
Sbjct 789612 TCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGC 789553
Query 193359 AT 193360
||
Sbjct 789552 AT 789551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899648720931600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |