Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq27 114 2e-20 >seq27 Length=788475 Score = 114 bits (126), Expect = 2e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || ||||| || | | || |||| ||||| || || || ||||| || |||| Sbjct 516411 AATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCG 516352 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 |||||||||||||| || || || || || || || || || || ||| ||||| Sbjct 516351 TTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGT 516292 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||||||||||||||||| ||||| || |||||||| || || || | || || || Sbjct 516291 ATCTGACGATTCTACTTCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTG 516232 Query 172067 CAT 172069 ||| Sbjct 516231 CAT 516229 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || |||||||| |||| || || || || || ||| Sbjct 516230 ATACCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCT 516171 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || | || ||||||||||| || | | |||||| |||||| Sbjct 516170 GACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGT 516111 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || |||||||| || ||| ||| ||||| || ||||| || || || Sbjct 516110 GGAATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCA 516051 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| ||||| || ||||| || || |||| ||| || ||||| Sbjct 516050 ACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905130286329000