Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq27 114 2e-20
>seq27
Length=788475
Score = 114 bits (126), Expect = 2e-20
Identities = 135/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || ||||| || | | || |||| ||||| || || || ||||| || ||||
Sbjct 516411 AATGTTGTAATCGGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCG 516352
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
|||||||||||||| || || || || || || || || || || ||| |||||
Sbjct 516351 TTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGT 516292
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
|||||||||||||||||||| ||||| || |||||||| || || || | || || ||
Sbjct 516291 ATCTGACGATTCTACTTCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTG 516232
Query 172067 CAT 172069
|||
Sbjct 516231 CAT 516229
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | || |||||||| |||| || || || || || |||
Sbjct 516230 ATACCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCT 516171
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || || | || ||||||||||| || | | |||||| ||||||
Sbjct 516170 GACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGT 516111
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || |||||||| || ||| ||| ||||| || ||||| || || ||
Sbjct 516110 GGAATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCA 516051
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | ||| ||||| || ||||| || || |||| ||| || |||||
Sbjct 516050 ACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905130286329000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |