Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq28 141 3e-28 seq8 136 1e-26 seq3 113 1e-19 seq2 105 2e-17 seq9 102 2e-16 >seq28 Length=721443 Score = 141 bits (156), Expect = 3e-28 Identities = 243/350 (69%), Gaps = 7/350 (2%) Strand=Plus/Minus Query 288882 GTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAA 288941 ||| | || ||||| |||||| || | || | |||||||| || ||| || || Sbjct 551230 GTCAAGTACATCGGGTCTGTTAGTACCAGCGAGCACAACAATTTGCTCAGTTGTATTGAA 551171 Query 288942 TCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCT 289001 |||||||| || ||||||||||| ||||| ||| | |||||| ||| ||||| Sbjct 551170 ACCATCCATCTCGGTCAAAATTTGATTGAGTGTAGCTTCGCGTTCATCGTTTCCACCTCC 551111 Query 289002 TGAA---TCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 ||| |||| || | || | || |||| |||||| || || |||||||| || Sbjct 551110 CGAAAATCCACCAGACTTGCCACGAGACTTCCCAATAGCATCGATCTCATCAATGAATAT 551051 Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118 | |||||||| | | | ||| || || ||||| | |||| || | |||||||||| Sbjct 551050 AATACACGGAGTACTCTTTCTTGCCATGGCAAAAAGATCTCGAACTCTCGATGCTCCAAC 550991 Query 289119 ACCAACATACATTTCTACAAATTCAGAA--GCGGATACTTGAATGAATGTTACATTTGCT 289176 ||| || |||| || ||||| || ||| | || ||| || ||||| ||| | | | Sbjct 550990 ACCCACGAACATCTCCACAAACTCGGAACCACTGACACT--AAAGAATGGTACTTGAGAT 550933 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 ||||| ||| |||| | || || || || ||||| || || |||||||| Sbjct 550932 TCGCCAGCTGTTGCCTTTGCTAGTAGAGTTTTACCAGTACCTGGTGGTCC 550883 >seq8 Length=1964072 Score = 136 bits (150), Expect = 1e-26 Identities = 707/1110 (64%), Gaps = 26/1110 (2%) Strand=Plus/Minus Query 155406 TCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTC 155465 || || | ||||||||| || | | ||| || || || | | |||||||| | |||| | Sbjct 141341 TCAGCAAGACCCTGAACACCGACAGCGATAGGTCGGTGACGGAAATTGCTCTT-CTTGGC 141283 Query 155466 TTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTT 155524 |||||| ||||||| | || | | || || || || |||||| |||| | |||| Sbjct 141282 TTCTTGAACTGGGTAATAGTTGATGTTGATGATCTTGTTCAAATTTCTAACAACAACCTG 141223 Query 155525 GGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCT-CATTT--ACAAACATACC 155581 || || || | || | ||| | ||| || | ||| | ||||| | Sbjct 141222 AGTGACCTCGTGAAGCTTGTGGAAATCATAAGTTCCCTCATTCATGTTGACAAAAGTTGG 141163 Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAA 155640 | | | ||||| |||| ||||| ||| ||| | || || | ||| || |||| Sbjct 141162 CAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCTGGCGCAGA-GTACTCGACAA 141104 Query 155641 TCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGT 155700 |||| ||| | ||| || || || || || | ||||| |||||| || ||| Sbjct 141103 TCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTACTCTTCTTGT 141044 Query 155701 TACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCT 155760 | || ||||| ||||| || ||| | || |||| ||||| | || || || ||||| Sbjct 141043 TGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGCCTCGAGAATAG 140984 Query 155761 TTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TTT 155818 ||| || | | || || || |||| |||| || ||| || | | Sbjct 140983 AGTACCAAAGCTTTTGAGCCTTGATAGTCTTGCGACCCTTGCCAGCCTTCTCGTAACTCT 140924 Query 155819 CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGG 155878 |||| | ||| | | | || || || ||| ||| || || || || | | ||| Sbjct 140923 CATAGAGAGCCTC--GAACTCTTCGCCATAAACATCTGCCAAACCCGGACATTCGTTGGG 140866 Query 155879 GCAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCC 155936 ||| | || | ||| | ||| | || ||||||| |||||||| |||| | Sbjct 140865 GCACATAAGAGTCCACTCTCCATT--CTTTTCAACACGCTTCATAAATAGATCAGGAATC 140808 Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGC 155996 || | || ||||| || || | ||| || || | ||| |||||||| || || Sbjct 140807 CACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGATTCTTGCGCAGA 140748 Query 155997 TCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTC 156056 || | || || || |||| ||| ||| || || || ||||| ||| |||| Sbjct 140747 TCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGAAAGCACCAGGT 140688 Query 156057 CTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGA 156113 | ||| ||||| ||||| ||||| | || || || ||||| || | |||||||| Sbjct 140687 CGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATAGGG 140628 Query 156114 ATAATACCATTGGAAGTGCCATTGGTTCCG-CGAA-TATGCGAACCAGATGAGCGAACAT 156171 | ||| || ||||| | || ||||| ||| ||| ||||| ||||| | || | Sbjct 140627 ACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGC--ACCAGTAGCACGGATTC 140570 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGCATTCCTTTAC 156229 | |||| | || ||||||||||| | ||| || ||||| || || ||| | Sbjct 140569 TGTGAACGTTGAGACCAATACCACCGG--CATTCTTCGAAATCATGGCACAAATCTTCAA 140512 Query 156230 AGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAA 156289 ||| | | ||||||| |||||| || || | ||| | || |||| || | Sbjct 140511 AGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCATGATGAAAG 140452 Query 156290 TTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATT 156349 ||| | | |||| ||||| || ||| ||||| || | ||||| | || ||||| || Sbjct 140451 TTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAAGTACTTGTT 140392 Query 156350 AGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGA 156409 ||||| | | ||||||||| || |||||| || | || ||||||| | | Sbjct 140391 TGACATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCATGAATACCAACGGC 140332 Query 156410 GACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTA 156469 || | ||| ||| || || ||||| ||| ||| ||||| | || |||||||| Sbjct 140331 AACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGGCGTAGAAGGTA 140272 Query 156470 TGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || | || ||||| || |||||||| || Sbjct 140271 TGATCTCTCGAGAGTCTTGAACCCGAAGTA 140242 >seq3 Length=2715537 Score = 113 bits (124), Expect = 1e-19 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 ||||||| ||||||||||| | ||||||||| | || ||||| || |||||| | | Sbjct 2405889 TTCCTTGCATTAAAAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCTA 2405830 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 |||||| |||||||| || || |||| || || || ||||| ||| || | | Sbjct 2405829 CCTTTGCTCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCT 2405770 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 || ||||| || ||||| || ||||||||| | | | ||||| ||| || |||| Sbjct 2405769 TCGCATCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACTTTCTCCAACG 2405710 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 |||| || || | ||||| | || |||||||| || || Sbjct 2405709 AACTCATCTCCCGTGACGAAGGTCTCCACACCGACTTCGC 2405670 >seq2 Length=2834403 Score = 105 bits (116), Expect = 2e-17 Identities = 197/287 (69%), Gaps = 8/287 (3%) Strand=Plus/Plus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 |||| | |||||| ||||||||||||||| | || || || || ||||| || | | Sbjct 1416169 TTGACAAGACGACGTTGAATATAACCAGTTTCTGCAGTCTTGACTGCGGTATCGATCAAA 1416228 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703 || |||||||| |||| || |||||||| | |||| ||| || || | | | Sbjct 1416229 CCTTCACGACCAGCCATTGCGTGGAAGAAGAACTCTGTAGGTGTGAGACCTCTCAGGTAA 1416288 Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763 ||| ||||||| || || | || || ||||||| || |||||| || ||||| ||| Sbjct 1416289 GAGTTCTCAACAAAGCCTCTCGATTCTGGCGAATAATCATCCTTGGTGAAATGTGGAAGG 1416348 Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCA----G 302819 || | || || | ||| | || ||||| || || ||||| || || |||| | Sbjct 1416349 GTGCGGTACTTGAAACCGAAAGGAATACGTTTACCTTCAACAGATTGTTGACCCACAAGG 1416408 Query 302820 GCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 ||| || |||||| |||||||| | | | || ||||| |||| Sbjct 1416409 GCA-GA---CATCTGAGAAATATTGATAGTAGAACCTTTGGAACCAG 1416451 >seq9 Length=1850997 Score = 102 bits (112), Expect = 2e-16 Identities = 173/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| ||| || | ||| || ||| ||||||| || | ||| | | || Sbjct 38550 ATGAGTCCACAAATATCGCAAATATGAACTCTGAAAGCATCCGAAACCTCAAACAACCTC 38491 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 | || ||| | ||||||||| ||||||||||||||||| ||||| || |||||| Sbjct 38490 TCTTTCAAGAAAGCACTTGCACCGTGAGAAATCATACAATCACGTTCCATCTCTCCGAAA 38431 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586 |||||||||||||| | || | ||| ||| |||| || | || ||| | | ||| Sbjct 38430 CGAAGACCACCATCTCTGGCACGACCTTCGACAGGTTGCCTGGTTAGAATTTGTACTGGA 38371 Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646 || ||| || ||| |||||| | |||||||| | ||| ||||| ||| | Sbjct 38370 CCTCTGGCACGAGCATGAATCTTATCGTCGACCATATGGCGCAAACGTTGGTAATATGTG 38311 Query 251647 GGACCGATGAA 251657 || || | ||| Sbjct 38310 GGGCCAAGGAA 38300 Score = 89.7 bits (98), Expect = 2e-12 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332 |||||||||| ||||||||||||||||||||| || || | ||| ||||||||||| | Sbjct 38472 GCACCGTGAGAAATCATACAATCACGTTCCATCTCTCCGAAACGAAGACCACCATCTCTG 38413 Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACC-CTGAGCACGATAATT 233391 | | ||| | ||| | ||| | |||| || | |||||| ||| |||||| || Sbjct 38412 GCACGACCTTCGACAGGTTGCCTGGTTAGAATTTGTACTGGACCTCTG-GCACGAGCATG 38354 Query 233392 AATTTTATCTTTAACCATATG 233412 ||| ||||| | |||||||| Sbjct 38353 AATCTTATCGTCGACCATATG 38333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808076880185