Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq28 116 5e-20 seq3 89.7 6e-12 >seq28 Length=721443 Score = 116 bits (128), Expect = 5e-20 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||| || ||||||||| | || || ||| |||| |||||| | || ||||| Sbjct 523927 GCTGCAAACTATCTTGACATCAAGGCACTCCTTGATGTTGGATGCAAGACCGTCGCCAAT 523986 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||| ||||| || |||||||||||||||||||| ||||||| Sbjct 523987 ATGATCAAGGGAAAGTCTCCAGAGGAGATCCGCAAGACCTTCAACATCA 524035 >seq3 Length=2715537 Score = 89.7 bits (98), Expect = 6e-12 Identities = 139/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||||||||| || ||| | ||||||| || | || |||| |||||| || ||||| Sbjct 2405687 ACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGGCCATGAGACCACGCTT 2405746 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||| | ||| || ||||| || || || || ||||| || || Sbjct 2405747 CTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGCAGCGAA 2405806 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG--TTG-ATCCACTTCATCGC 869355 ||| ||| || | |||||| || ||| | |||| ||| |||||||| | || Sbjct 2405807 TGCGACGAGACGTTGAGCAAAG--GTAGAG----TTCTTGTCTTGAATCCACTTGACAGC 2405860 Query 869356 CCAGTCGGCCTTTTT 869370 |||||||||||| || Sbjct 2405861 CCAGTCGGCCTTCTT 2405875 Score = 86.0 bits (94), Expect = 8e-11 Identities = 166/243 (68%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || | | ||||||||||||||| ||||| | | ||||| Sbjct 2405373 GCCTTTTGGTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATG 2405432 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGA--GCGACG 868808 |||||| | ||| ||||||| | | |||| || ||| || | |||| | Sbjct 2405433 TTCTCCATGAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGCCCAAAGCGATG 2405492 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 || || || || || || ||||||||||| || |||||| ||||||||||| | Sbjct 2405493 AGA--AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGCGTTCATGCCTA 2405550 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 ||| || || || | |||| ||| || |||| |||||| |||||||| || || Sbjct 2405551 AGAGAGCACATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGA 2405610 Query 868929 TGA 868931 ||| Sbjct 2405611 TGA 2405613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107097757335085