Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq27 127 2e-24 seq17 118 1e-21 seq1 95.1 1e-14 >seq27 Length=788475 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | || ||||| || |||||| | ||||||||| | | Sbjct 516229 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACAATTACGTTAGAAGTAGAATCGTCA 516288 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || || ||| Sbjct 516289 GATACTATTGATAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCTGACCAA 516348 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||||||| || || ||| ||||||| |||| | | || ||||| ||| Sbjct 516349 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCCGATTACAAC 516408 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||||||||| || || ||||||||| Sbjct 516409 ATTCAAAAGGAGAGCACCCTGCACTTGGTG 516438 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || ||||| || || || || || ||||| ||| | | ||||| | || | Sbjct 515788 AAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCGATAAT 515847 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||| || || || || || ||||||||||| |||||||| || Sbjct 515848 GTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGATTTTC 515907 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| || || || |||||| | | | | || || || || ||||| ||||| ||| Sbjct 515908 GCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGGAGTCG 515967 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || | || || || Sbjct 515968 ACCCTTCACTTGGTCCTGAGACTTCGTGGTGG 515999 Score = 98.7 bits (108), Expect = 9e-16 Identities = 133/184 (72%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || || ||||| || || || || ||| ||| ||| || | || | || || | Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGTCA 515573 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||||||||| || || ||||| || ||||| ||||| |||||||| || ||||| || Sbjct 515574 AAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 515633 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA- 24906 || || |||||| | | | || || || |||||||||||||| || || || || Sbjct 515634 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCAT 515693 Query 24907 CTTG 24910 |||| Sbjct 515694 CTTG 515697 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || | || || || || || || | || || || | | Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||| ||||| || || || || || || |||||| Sbjct 516061 GATACGATCGACAATGTCAAATCTAAGATTCAAGATAAGGAGGGTATTCCACCTGATCAA 516120 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||||| || ||| | | ||||||| || ||| Sbjct 516121 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTACAAC 516180 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||||||||| || |||| ||||| Sbjct 516181 ATCCAAAAGGAATCTACCTTACATTTGGT 516209 >seq17 Length=1064257 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| || || ||||| || || | | Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || ||||| || ||||| ||| Sbjct 789611 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 789670 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || || || |||||| | | | || || || ||| Sbjct 789671 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 789730 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| || || || |||||||||||||| Sbjct 789731 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGCG 789765 >seq1 Length=6243313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || || || || || || || || || || || | ||||| | || | Sbjct 2454602 AAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATTGACAAT 2454661 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct 2454662 GTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTGATCTTC 2454721 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 || || || || || ||||| | | | |||||||| ||||| ||||||| Sbjct 2454722 GCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAAGG 2454776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894760021400