Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq28 111 2e-18 seq3 87.8 3e-11 >seq28 Length=721443 Score = 111 bits (122), Expect = 2e-18 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || ||||| || ||||||||| | ||||| ||| | || ||||||||||| ||||| Sbjct 523927 GCTGCAAACTATCTTGACATCAAGGCACTCCTTGATGTTGGATGCAAGACCGTCGCCAAT 523986 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||| ||||| || ||||| |||||||||||||| ||||||| Sbjct 523987 ATGATCAAGGGAAAGTCTCCAGAGGAGATCCGCAAGACCTTCAACATCA 524035 >seq3 Length=2715537 Score = 87.8 bits (96), Expect = 3e-11 Identities = 171/251 (68%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || | | ||||||||||||||| ||||| | | Sbjct 2405365 TGACACCGGCCTTTTGGTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCA 2405424 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||| |||||| | ||| |||||||| | | ||| |||||| || | Sbjct 2405425 ATGAGATGTTCTCCATGAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGCCCA 2405484 Query 794011 --GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||| | || || || || || ||||| || ||||| || |||||| ||||| Sbjct 2405485 AAGCGATG--AGAAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGCGTT 2405542 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||| | ||| || || || | |||| | | || |||| |||||| |||||||| Sbjct 2405543 CATGCCTAAGAGAGCACATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGC 2405602 Query 794129 CTCGATGATGA 794139 || |||||| Sbjct 2405603 TTCAGTGATGA 2405613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916192680846695