Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq27 132 3e-26 seq17 120 2e-22 seq1 95.1 8e-15 >seq27 Length=788475 Score = 132 bits (146), Expect = 3e-26 Identities = 156/209 (75%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||||||||| ||||| ||| |||||||||||| || ||||| || ||| | || || Sbjct 515987 CTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGACCA 515928 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || ||||||||||||||||| |||| || || || || | || | |||||||| Sbjct 515927 TCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACCCTCCTTA 515868 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938 || | || ||| ||||| || ||||||| ||| | ||||| |||| ||| Sbjct 515867 TCTTGGATCTTTGACTTGAC--AT--TATCGATGGTGTCAGAAGATTCGACTTCAAGGGT 515812 Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 ||||||||||| ||||||||||| |||| Sbjct 515811 GATGGTCTTTCCGGTGAGGGTCTTGACAA 515783 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||||||||||| |||||||| || || || ||| | | | || Sbjct 516440 AGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCC 516381 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| || ||||||| |||||| ||||| | || | ||||||||||| Sbjct 516380 TCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCC 516321 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | || || || | || || ||| Sbjct 516320 TGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTC 516261 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| |||||||| ||||| Sbjct 516260 TTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 82.4 bits (90), Expect = 5e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| | | |||| |||| || ||||||||||||||||| Sbjct 515681 CTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAA 515622 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || || ||||| | || | |||||||| || | || ||| |||||| Sbjct 515621 AATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTTATCTTGGATCTTTGACTTGACGTT 515562 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGT 34953 | || | || ||| ||||| |||| ||| || ||||| || || Sbjct 515561 GTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATAGTCTTGCCAGT 515514 >seq17 Length=1064257 Score = 120 bits (132), Expect = 2e-22 Identities = 157/215 (73%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| |||| |||||| || ||||| ||||| || || | || |||| || Sbjct 789759 ACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCA 789700 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 ||||||||||| |||||||||| ||| || ||||| | || | ||||||||||| | Sbjct 789699 AGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGG 789640 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944 || || ||||| || | ||||| || | ||| || || | ||| ||||| Sbjct 789639 ATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 789584 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 || ||||| |||||||| || ||||||||||||| Sbjct 789583 TTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGA 789549 >seq1 Length=6243313 Score = 95.1 bits (104), Expect = 8e-15 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| || || || || | || | || || ||||||||||| ||||||| Sbjct 2454776 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 2454717 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||||| || || | || | ||||||||||| | || || ||||| Sbjct 2454716 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2454657 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | ||| || |||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct 2454656 CAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 2454597 Query 34968 AG 34969 || Sbjct 2454596 AG 2454595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690795462595