Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq27 132 3e-26
seq17 120 2e-22
seq1 95.1 8e-15
>seq27
Length=788475
Score = 132 bits (146), Expect = 3e-26
Identities = 156/209 (75%), Gaps = 8/209 (4%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||||||||| ||||| ||| |||||||||||| || ||||| || ||| | || ||
Sbjct 515987 CTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGACCA 515928
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || ||||||||||||||||| |||| || || || || | || | ||||||||
Sbjct 515927 TCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACCCTCCTTA 515868
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938
|| | || ||| ||||| || ||||||| ||| | ||||| |||| |||
Sbjct 515867 TCTTGGATCTTTGACTTGAC--AT--TATCGATGGTGTCAGAAGATTCGACTTCAAGGGT 515812
Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
||||||||||| ||||||||||| ||||
Sbjct 515811 GATGGTCTTTCCGGTGAGGGTCTTGACAA 515783
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||||||||||| |||||||| || || || ||| | | | ||
Sbjct 516440 AGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCCGTCC 516381
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| |||||||| || ||||||| |||||| ||||| | || | |||||||||||
Sbjct 516380 TCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCC 516321
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | || || || | || || |||
Sbjct 516320 TGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTC 516261
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | |||||| |||||||| |||||
Sbjct 516260 TTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 82.4 bits (90), Expect = 5e-11
Identities = 119/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| |||||||| ||||| | | |||| |||| || |||||||||||||||||
Sbjct 515681 CTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAA 515622
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| || || ||||| | || | |||||||| || | || ||| ||||||
Sbjct 515621 AATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTTATCTTGGATCTTTGACTTGACGTT 515562
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGT 34953
| || | || ||| ||||| |||| ||| || ||||| || ||
Sbjct 515561 GTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATAGTCTTGCCAGT 515514
>seq17
Length=1064257
Score = 120 bits (132), Expect = 2e-22
Identities = 157/215 (73%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||||| |||| |||||| || ||||| ||||| || || | || |||| ||
Sbjct 789759 ACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCA 789700
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
||||||||||| |||||||||| ||| || ||||| | || | ||||||||||| |
Sbjct 789699 AGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGG 789640
Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944
|| || ||||| || | ||||| || | ||| || || | ||| |||||
Sbjct 789639 ATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 789584
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979
|| ||||| |||||||| || |||||||||||||
Sbjct 789583 TTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGA 789549
>seq1
Length=6243313
Score = 95.1 bits (104), Expect = 8e-15
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| || ||||| || || || || | || | || || ||||||||||| |||||||
Sbjct 2454776 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 2454717
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||||| || || | || | ||||||||||| | || || |||||
Sbjct 2454716 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2454657
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | ||| || |||||| |||| ||| |||||||| ||||| |||||||| || |
Sbjct 2454656 CAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 2454597
Query 34968 AG 34969
||
Sbjct 2454596 AG 2454595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325690795462595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |