Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq27 105 5e-18
>seq27
Length=788475
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| || || ||| || ||||||||||| ||||| | || ||| |
Sbjct 516444 ACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCC 516385
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || | || || || ||| | ||||||| ||| || || || ||||||||||| ||
Sbjct 516384 GTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTT 516325
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||||| | || | ||| || || ||||||||| | || ||
Sbjct 516324 GTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAAT 516265
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| ||||| || ||||| || |||||
Sbjct 516264 TGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 100 bits (110), Expect = 2e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||||||| | || ||||| ||||| ||||| || || | | |||||
Sbjct 516216 ACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCC 516157
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | || | | || ||||| || ||||||||||| ||
Sbjct 516156 ATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTT 516097
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||||| ||| || | ||||||| | || | || || || || || || | ||| |
Sbjct 516096 ATCTTG-AATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGA 516038
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || ||||| ||||| ||||| || || |||||
Sbjct 516037 TGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGA 29630
|| ||||| | ||| ||||| || || ||||||||||| || || | ||| |||||||
Sbjct 515704 CGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAA-GGTGCGACC 515646
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| || || || | ||||| | || || || || ||||| ||||| ||
Sbjct 515645 ATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTT 515586
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||||| | ||| ||||| | || | || || ||| || ||||| || ||
Sbjct 515585 ATCTTGGATCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGAT 515526
Query 29751 AGTTTTGCCAGT 29762
||| ||||||||
Sbjct 515525 AGTCTTGCCAGT 515514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385216829096205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |