Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq27 105 5e-18 >seq27 Length=788475 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || || ||| || ||||||||||| ||||| | || ||| | Sbjct 516444 ACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGTTCTGCC 516385 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | || || || ||| | ||||||| ||| || || || ||||||||||| || Sbjct 516384 GTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTT 516325 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||| || || ||||||||| | || || Sbjct 516324 GTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAAT 516265 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| || ||||| || ||||| Sbjct 516264 TGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||||||| | || ||||| ||||| ||||| || || | | ||||| Sbjct 516216 ACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCC 516157 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | | || ||||| || ||||||||||| || Sbjct 516156 ATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTT 516097 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | ||||||| | || | || || || || || || | ||| | Sbjct 516096 ATCTTG-AATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGA 516038 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| ||||| ||||| || || ||||| Sbjct 516037 TGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGA 29630 || ||||| | ||| ||||| || || ||||||||||| || || | ||| ||||||| Sbjct 515704 CGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAA-GGTGCGACC 515646 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| || || || | ||||| | || || || || ||||| ||||| || Sbjct 515645 ATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTT 515586 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||| ||||| | || | || || ||| || ||||| || || Sbjct 515585 ATCTTGGATCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGAT 515526 Query 29751 AGTTTTGCCAGT 29762 ||| |||||||| Sbjct 515525 AGTCTTGCCAGT 515514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385216829096205