Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq27 161 7e-34 seq2 131 1e-24 seq60 107 1e-17 seq1 95.1 9e-14 >seq27 Length=788475 Score = 161 bits (178), Expect = 7e-34 Identities = 480/732 (66%), Gaps = 10/732 (1%) Strand=Plus/Plus Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210 |||||| ||||| ||| | ||| | | ||||| | || || || |||||||| || Sbjct 605752 TTTTCTTTTGAATTCTGCGACAAAGTGATTGACAAGTCTGTTGTCGAAGTCTTCACCACC 605811 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 ||| | ||| | || | || | | || | ||| | || || || | | ||| || Sbjct 605812 CAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATGGTCAAGAG 605871 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 || ||||| ||||| ||||| | ||| || || || || || || || Sbjct 605872 AGAGACATCGAAAGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGCTCACCCTCAAT 605931 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 || || || | ||| || |||| ||||| || || || || || || || | | ||| Sbjct 605932 CTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCGGTAGGCTCGTTGATGATACGGAGAAC 605991 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 |||||||||||||| || || || ||||||||||| | |||||||||| | || || Sbjct 605992 GTTAAGACCAGCAATGAGACCAGCGTCCTTAGTGGCTTGACGTTGTGAATCGGTGAAGTA 606051 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA---ATATAAGCGCTTGCTGT 282507 || || || || | || || | ||||| | ||||| | ||||| || || Sbjct 606052 AGCTGGGACTGTGACGACAGCGT-TGTTA--ACAGTTCCACCGAGGTAAGCCTCAGCAGT 606108 Query 282508 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTC 282567 | | |||| || || ||||| || || |||| |||||| | |||||||| || Sbjct 606109 CTCTCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTGAATTGCTTGTTCTC 606168 Query 282568 -ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCC 282626 |||| | || || | ||| || |||| | ||| || || ||||| Sbjct 606169 GCCCTTGA-ACTCGACCTCGATGACTGGCTTTCCACCACGGTCAATGACCTTGAATGGGA 606227 Query 282627 AATATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTTT 282685 | | |||||||| | |||||| || | || || | | |||||| || || || Sbjct 606228 AGTGCTTCATATCGGCTTGAAC-CTCAGCATCTGCGAACTTGCGACCAATCAAACGCTTA 606286 Query 282686 GCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATC 282745 ||||| || | || ||| |||| || | || |||||| ||||| |||||||| ||| Sbjct 606287 GCATCGAAGACGGTGTTGATTGGGTTCATGGCGACTTGATTCTTGGCGGCATCTCCGATC 606346 Query 282746 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTC 282805 ||| | || || ||||| || | ||| | ||||| || || || || ||||| || || Sbjct 606347 AGACGCTCGGTATCTGTGAAAGCAACGAAGGATGGGGTGGTACGGTTTCCTTGGTCGTTG 606406 Query 282806 GCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAA 282865 || |||||||| | | || ||| | | | ||| |||||| | || || || ||| Sbjct 606407 GCGATAATTTCGATTCTATCATCACGGAAGATACCCACACAAGAGTAGGTGGTACCCAAA 606466 Query 282866 TCAATACCAATA 282877 || ||||||||| Sbjct 606467 TCGATACCAATA 606478 Score = 123 bits (136), Expect = 2e-22 Identities = 259/384 (67%), Gaps = 3/384 (1%) Strand=Plus/Plus Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 ||||| || || | || || |||||||| | ||| |||||||| ||||||||||| || Sbjct 604675 GGCAGAGACGTTCATGATTCCGTTGGCATCAAGATCGAATGTGACCTCAATTTGAGGAAC 604734 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 || | | ||||||||||| || | | ||| | |||| | || || || || Sbjct 604735 ACCACGTGGTGCAGGTGGGATACCAGTAAGCTCGAATTTGCCCAAAAGGTTGTTGTCCTT 604794 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 ||| || || ||||||||||| | |||||| || | | ||| || ||||| | Sbjct 604795 GGTGCGTTGACGCTCACCCTCGAAGACTTGGATGAGGACACCTGGTTGGTTGTCTGAGAA 604854 Query 281605 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || | || || || || || || || || |||||||| ||| | ||||| Sbjct 604855 GGTGGAGAAGACCTCAGACTTCTTGGTTGGGATGGTAGTGTTTCTTGGAATGAGCTTGGT 604914 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| |||||||| || || | ||||||||| | || | |||||| | |||| || Sbjct 604915 CATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGGGCGACATCGAGAAGGAGGAT 604974 Query 281725 AT--TTTGAAGTTTTTCA-TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 | || | || || | ||| | |||| ||||| || || || | |||||||| Sbjct 604975 CTCGTTGGTAGACTTGGAGGAAGTGTCACCAGAGAGAATGGCAGCCTGGACGGCAGCACC 605034 Query 281782 ATATGCAACAGCTTCATCAGGATT 281805 ||||||||||| |||||||| || Sbjct 605035 GTATGCAACAGCCTCATCAGGGTT 605058 >seq2 Length=2834403 Score = 131 bits (144), Expect = 1e-24 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || | |||||||||||||||||||||||||| | ||||| ||| Sbjct 1417712 GGTAAGGAGGGTCGTCTTCGTGGAAATTTGATGGGAAAGCGTGTCGACTTTTCTGCTCGT 1417653 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || ||||||||| |||||| ||| || | || |||| |||||||| |||| | |||| Sbjct 1417652 ACTGTTATTACTGGTGATCCCAATCTTTCCCTGGATGAGGTTGGTGTCCCTCGAAGTATT 1417593 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTATTTGACTCAA 432467 |||| || || || | | || | ||| ||| || || || ||| | ||| ||| Sbjct 1417592 GCGAGAATCCTCACATATCCAGAGACTGTTACACCACTCAACATCGATAAATTGCATCAG 1417533 Query 432468 TTAGTGAAAAATGG--TAAAAGAGTATATCCAGGTGCCAATTTTGTAATC 432515 | || || ||||| | | ||| |||| |||||||| | ||| ||| Sbjct 1417532 CTCGTTAAGAATGGCCCAGATGAG--CATCCTGGTGCCAAATATGTCATC 1417485 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || || |||||||| | ||||||||||||||||||| | || |||| || | || ||| Sbjct 1416263 GAGTTCTTCTTCCACGCAATGGCTGGTCGTGAAGGTTTGATCGATACCGCAGTCAAGACT 1416204 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 || || ||||||||||||||| | |||||||| || || ||| ||| | || Sbjct 1416203 GCAGAAACTGGTTATATTCAACGTCGTCTTGTCAAAGCTCTCGAGGATGTTATGGCAAAA 1416144 Query 435253 TATGATGGTACAGT 435266 ||||| ||||| || Sbjct 1416143 TATGACGGTACTGT 1416130 >seq60 Length=53878 Score = 107 bits (118), Expect = 1e-17 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || || | ||| || || | ||||||||||||||| ||||| | || ||| | || || Sbjct 27801 TTCTCCAAACCGTAAGCGAGAGCAGCAGCAGTTGGCTCATTGACAACTCTGAGGACGTTC 27860 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | ||| |||||| || ||||| ||||| ||||| | ||| |||||||| || ||||| Sbjct 27861 AAACCGGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGGGAATCGTTGAAGTATGCG 27920 Query 282455 GGAACAGTAATAACGGCAT 282473 |||||||||| ||||||| Sbjct 27921 GGAACAGTAACGACGGCAT 27939 >seq1 Length=6243313 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 131165 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 131224 || |||||| | ||||| || || ||||||||||||||||| ||| | || | | | || Sbjct 4573959 AACATAAAAGTCGTAGTCGCAACGATAGCATTTGGTATGGGAATTGACAAGCAGAACGTG 4573900 Query 131225 AGAGTTGTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGT 131284 || |||| |||||||| | |||||| | | | ||||| ||||| || |||| ||| Sbjct 4573899 CGATTTGTCATTCATTATTGCCTTCCCAAAACTTTAGAAGGCTATTACCAGGAAACTGGG 4573840 Query 131285 AGAGCAGGTCGTGATGG 131301 |||| ||||| ||||| Sbjct 4573839 CGAGCTGGTCGAGATGG 4573823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740605606634130