Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq27 134 3e-26 >seq27 Length=788475 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || || || | |||||||| || || || || || || | Sbjct 516229 TACCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTG 516170 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | || ||||| || || || ||||||||||| || | |||||||| || | Sbjct 516169 ACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTG 516110 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||||||||| | ||| ||||| || |||||||| | || | Sbjct 516109 GAATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAA 516050 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || ||||| || ||||| ||||| || || || ||||| Sbjct 516049 CCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 ||| || ||||| || || || || ||||| ||||| || || || || | | ||| || Sbjct 515985 CAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGACCATC 515926 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 || ||||| ||||| || || || | | |||||||| || || || || |||||||| Sbjct 515925 CTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACCCTCCTTATC 515866 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 ||| ||||||| || ||||| || || || ||| || ||| ||||| | || || || Sbjct 515865 TTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACTTCAAGGGTGATGGT 515806 Query 82778 CTTGCCTGTCAACGTCTTTACAAATA 82803 ||| || || | ||||| |||| || Sbjct 515805 CTTTCCGGTGAGGGTCTTGACAACTA 515780 Score = 87.8 bits (96), Expect = 4e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || ||||| || || || || || || ||| | | | ||| || || ||||| Sbjct 515692 TGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAAGTTGC 515633 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| || || || | | ||||| || || || ||||| ||||||||||| |||||| Sbjct 515632 TTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCCCTCCTTATCTTGGATCTTT 515573 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || || || ||||| ||||| | | ||| || || | || || |||||||| ||| Sbjct 515572 GACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATAGTCTTGCCAGTC 515513 Query 82788 A 82788 | Sbjct 515512 A 515512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981820847271195