Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq8 183 7e-41 seq3 105 2e-17 >seq8 Length=1964072 Score = 183 bits (202), Expect = 7e-41 Identities = 492/740 (66%), Gaps = 13/740 (2%) Strand=Plus/Plus Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 |||||||| ||||| ||| | | |||||||| ||||||||||||| |||||||| | Sbjct 140302 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCATGGTGATGATATTGAG 140361 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || ||| || || | | | || ||| | | ||||| | || || Sbjct 140362 AGTGCTATCGAGACATACAACTTGATGTCAAACAAGTACTTCACCCATGCCTCCCCGACA 140421 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || || || |||||| || |||| | | || ||||| || | | || || Sbjct 140422 CTCTTCTCTGCGGGAACTCCACAAGCACAACTTTCATCATGCTTCCTCATCGACATGAAG 140481 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602 || || |||||| |||||||| || || || |||| ||| | ||||| || || Sbjct 140482 GAGGACAGTATTGATGGTATTTACGACACT-TTGAAGATTTGTGCCATGATTTCGAAGAA 140540 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA- 110661 | || || |||||| | ||||||| || || | | || ||| | ||||| Sbjct 140541 TGCCGGTGGTATTGGTCTCAACGTTCACAGAATCCGTGCTACTGGTGCATACATCGCCGG 140600 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 || | | || || |||| | | |||| || ||| | |||| |||||| |||| || | Sbjct 140601 CACCAACGGAAACTCCAACGGCA-TTGTCCCTATGCTCCGAGTTTTCAACAACACCGCCA 140659 Query 110722 AATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778 |||||| |||||||||| |||| || ||| | || ||||| || || ||||| | Sbjct 140660 GATATGTTGATCAAGGTGGTAATAAGCGACCTGGTGCTTTCGCTATTTACCTTGAACCAT 140719 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 ||||| | || | || || || | || || || || ||||| || |||||| Sbjct 140720 GGCATGCTGACGTTTTCGAGTTTCTTGATCTGCGCAAGAATCATGGCAAGGAAGAAGTTC 140779 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 | ||||||||| | || || || |||||||| | ||| |||| ||||| |||||| || Sbjct 140780 GTGCACGTGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTTATGAAGCGTGTTGAAA 140839 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATAT 110957 | ||||| |||| |||||||||| || || || | ||| ||| | | ||||| ||| Sbjct 140840 AGAATGGAGAGTGGACTCTTATGTG-CCCCAACGAATGTCCGGGTTTGGCAGATGTTTAT 140898 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-ACA 111016 || ||||||| || | || || || | || || || | |||||| |||||| || Sbjct 140899 GGCGAAGAGTTCGAGGCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTCGCAAGACT 140958 Query 111017 AATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075 | || | |||||| | ||||||| | || || || | ||| || || |||| || Sbjct 140959 A--TCAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAGGCCCAAACCGAGACGGGAAATC 141016 Query 111076 CTTATATTTTGTATAAAGAT 111095 ||| || | || |||||| Sbjct 141017 CTTTCATGCTTTACAAAGAT 141036 >seq3 Length=2715537 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 ||||| ||||||||||| || || |||||| | || ||||||||||| | | ||| Sbjct 2405889 TTCCTTGCATTAAAAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCTA 2405830 Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906 ||| || | | || || || || ||| ||||||||||| ||||| || || | | Sbjct 2405829 CCTTTGCTCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCT 2405770 Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966 || ||||||| ||||| ||||||||||| | ||| | ||||| | || ||||| Sbjct 2405769 TCGCATCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACTTTCTCCAACG 2405710 Query 131967 AATTCATCTCGAGAGATGAAG 131987 || ||||||| | || |||| Sbjct 2405709 AACTCATCTCCCGTGACGAAG 2405689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186805120950305