Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq8 183 7e-41
seq3 105 2e-17
>seq8
Length=1964072
Score = 183 bits (202), Expect = 7e-41
Identities = 492/740 (66%), Gaps = 13/740 (2%)
Strand=Plus/Plus
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| ||||| ||| | | |||||||| ||||||||||||| |||||||| |
Sbjct 140302 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCATGGTGATGATATTGAG 140361
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|| ||| || || | | | || ||| | | ||||| | || ||
Sbjct 140362 AGTGCTATCGAGACATACAACTTGATGTCAAACAAGTACTTCACCCATGCCTCCCCGACA 140421
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543
|| || || |||||| || |||| | | || ||||| || | | || ||
Sbjct 140422 CTCTTCTCTGCGGGAACTCCACAAGCACAACTTTCATCATGCTTCCTCATCGACATGAAG 140481
Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602
|| || |||||| |||||||| || || || |||| ||| | ||||| || ||
Sbjct 140482 GAGGACAGTATTGATGGTATTTACGACACT-TTGAAGATTTGTGCCATGATTTCGAAGAA 140540
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA- 110661
| || || |||||| | ||||||| || || | | || ||| | |||||
Sbjct 140541 TGCCGGTGGTATTGGTCTCAACGTTCACAGAATCCGTGCTACTGGTGCATACATCGCCGG 140600
Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721
|| | | || || |||| | | |||| || ||| | |||| |||||| |||| || |
Sbjct 140601 CACCAACGGAAACTCCAACGGCA-TTGTCCCTATGCTCCGAGTTTTCAACAACACCGCCA 140659
Query 110722 AATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778
|||||| |||||||||| |||| || ||| | || ||||| || || ||||| |
Sbjct 140660 GATATGTTGATCAAGGTGGTAATAAGCGACCTGGTGCTTTCGCTATTTACCTTGAACCAT 140719
Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838
||||| | || | || || || | || || || || ||||| || ||||||
Sbjct 140720 GGCATGCTGACGTTTTCGAGTTTCTTGATCTGCGCAAGAATCATGGCAAGGAAGAAGTTC 140779
Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898
| ||||||||| | || || || |||||||| | ||| |||| ||||| |||||| ||
Sbjct 140780 GTGCACGTGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTTATGAAGCGTGTTGAAA 140839
Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATAT 110957
| ||||| |||| |||||||||| || || || | ||| ||| | | ||||| |||
Sbjct 140840 AGAATGGAGAGTGGACTCTTATGTG-CCCCAACGAATGTCCGGGTTTGGCAGATGTTTAT 140898
Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-ACA 111016
|| ||||||| || | || || || | || || || | |||||| |||||| ||
Sbjct 140899 GGCGAAGAGTTCGAGGCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTCGCAAGACT 140958
Query 111017 AATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075
| || | |||||| | ||||||| | || || || | ||| || || |||| ||
Sbjct 140959 A--TCAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAGGCCCAAACCGAGACGGGAAATC 141016
Query 111076 CTTATATTTTGTATAAAGAT 111095
||| || | || ||||||
Sbjct 141017 CTTTCATGCTTTACAAAGAT 141036
>seq3
Length=2715537
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846
||||| ||||||||||| || || |||||| | || ||||||||||| | | |||
Sbjct 2405889 TTCCTTGCATTAAAAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCTA 2405830
Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906
||| || | | || || || || ||| ||||||||||| ||||| || || | |
Sbjct 2405829 CCTTTGCTCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCT 2405770
Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966
|| ||||||| ||||| ||||||||||| | ||| | ||||| | || |||||
Sbjct 2405769 TCGCATCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACTTTCTCCAACG 2405710
Query 131967 AATTCATCTCGAGAGATGAAG 131987
|| ||||||| | || ||||
Sbjct 2405709 AACTCATCTCCCGTGACGAAG 2405689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186805120950305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |