Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq8 87.8 2e-12
seq27 84.2 2e-11
>seq8
Length=1964072
Score = 87.8 bits (96), Expect = 2e-12
Identities = 190/278 (68%), Gaps = 10/278 (4%)
Strand=Plus/Minus
Query 138126 AGCACGAATT-TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCAC 138184
|||||| ||| || | |||||||| || || || || | | || || ||||||||||
Sbjct 140580 AGCACGGATTCTGTGA-ACGTTGAGACCAATACCACCGGCATTCTTCGAAATCATGGCAC 140522
Query 138185 AATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAAC 138244
|| || | ||| || || || | || ||||| |||| |||| || || | |
Sbjct 140521 AAATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGC 140462
Query 138245 ACGACGACATTTGAGGCATTTTCA-TGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTA 138303
| || || | ||| | | | | | | || || ||||| || || || || |||||
Sbjct 140461 ATGATGAAAGTTGTG-CTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTG 140403
Query 138304 AA---CATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCA 138360
|| | | || || |||||| | |||| |||||| |||||||| ||||||||||||
Sbjct 140402 AAGTACTTGTTTGA---CATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCA 140346
Query 138361 TGAATCTGAAGAGCGACACGCATCAGCATGTGTTGAGG 138398
||||| || || |||||||| | ||| ||||| ||
Sbjct 140345 TGAATACCAACGGCAACACGCATGATCATTTGTTGTGG 140308
>seq27
Length=788475
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 25185 TTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCG 25244
|||| || || | |||||||| | ||||| | ||||||||| | || || ||||
Sbjct 515783 TTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCG 515842
Query 25245 AGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCA 25304
| | || || ||| || ||||| |||||||| || |||||||| || | | |
Sbjct 515843 ATAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGA 515902
Query 25305 TTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAG 25364
||| || ||| || ||||| || |||| | | | || ||| ||||||||||| || |
Sbjct 515903 TTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGG 515962
Query 25365 AATCCACCATTCATTTAGT 25383
| || ||| |||| || ||
Sbjct 515963 AGTCGACCCTTCACTTGGT 515981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445091590341600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |