Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 seq27 84.2 2e-11 >seq8 Length=1964072 Score = 87.8 bits (96), Expect = 2e-12 Identities = 190/278 (68%), Gaps = 10/278 (4%) Strand=Plus/Minus Query 138126 AGCACGAATT-TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCAC 138184 |||||| ||| || | |||||||| || || || || | | || || |||||||||| Sbjct 140580 AGCACGGATTCTGTGA-ACGTTGAGACCAATACCACCGGCATTCTTCGAAATCATGGCAC 140522 Query 138185 AATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAAC 138244 || || | ||| || || || | || ||||| |||| |||| || || | | Sbjct 140521 AAATCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGC 140462 Query 138245 ACGACGACATTTGAGGCATTTTCA-TGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTA 138303 | || || | ||| | | | | | | || || ||||| || || || || ||||| Sbjct 140461 ATGATGAAAGTTGTG-CTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTG 140403 Query 138304 AA---CATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCA 138360 || | | || || |||||| | |||| |||||| |||||||| |||||||||||| Sbjct 140402 AAGTACTTGTTTGA---CATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCA 140346 Query 138361 TGAATCTGAAGAGCGACACGCATCAGCATGTGTTGAGG 138398 ||||| || || |||||||| | ||| ||||| || Sbjct 140345 TGAATACCAACGGCAACACGCATGATCATTTGTTGTGG 140308 >seq27 Length=788475 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 25185 TTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCG 25244 |||| || || | |||||||| | ||||| | ||||||||| | || || |||| Sbjct 515783 TTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCG 515842 Query 25245 AGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCA 25304 | | || || ||| || ||||| |||||||| || |||||||| || | | | Sbjct 515843 ATAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGA 515902 Query 25305 TTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAG 25364 ||| || ||| || ||||| || |||| | | | || ||| ||||||||||| || | Sbjct 515903 TTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGG 515962 Query 25365 AATCCACCATTCATTTAGT 25383 | || ||| |||| || || Sbjct 515963 AGTCGACCCTTCACTTGGT 515981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445091590341600