Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq27 131 2e-25 >seq27 Length=788475 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || ||||||||||||||||||||||||| Sbjct 516455 CCACCACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAA 516396 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| |||| |||| |||||| || ||||| ||||| || || ||||| | ||| Sbjct 516395 AGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGA 516336 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | || || |||||| || Sbjct 516335 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACT 516276 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||| || || ||||| ||||| || || ||||| || ||||| Sbjct 516275 TCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 104 bits (114), Expect = 2e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||| | ||| | |||| |||||||||||||||||| || | Sbjct 515716 CCACCACGAAGGCGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTC 515657 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || || || ||||| || || || ||||| ||||| ||||| | ||| Sbjct 515656 AAGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGA 515597 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| || ||||||| ||| | |||| | | || ||||| ||||| || Sbjct 515596 ATTCCCTCCTTATCTTGGATCTTTGACTTGA-CGTTGTCAATGGTATCGCTGGATTCGAC 515538 Query 35689 CTCCACCGTGATCGTTTTACCCGTCA 35714 ||| | ||||| || || || |||| Sbjct 515537 CTCAAGGGTGATAGTCTTGCCAGTCA 515512 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||||||||| ||| |||||||| |||||||| || | | Sbjct 516227 CCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGAC 516168 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || ||||||||||| ||||| || | ||||| || || | ||| Sbjct 516167 AACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGA 516108 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||| || ||||| || | | | | | ||| || || || ||| Sbjct 516107 ATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACC 516048 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || ||||| || || || || || ||||| Sbjct 516047 TCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790754365400