Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq45 136 3e-27 seq9 86.0 5e-12 >seq45 Length=191974 Score = 136 bits (150), Expect = 3e-27 Identities = 266/392 (68%), Gaps = 11/392 (3%) Strand=Plus/Plus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500 || ||||||||| | | ||||||||||| |||||||| ||||||||| | ||| | Sbjct 174743 AACGGTCCTGAAGTACTTAATAAATATGTTGGTCAATCCGAAGAAAATATTCGAAAGCTC 174802 Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTAT 19559 ||||| || || ||| ||| | | || | |||| | | | ||| | | || || || Sbjct 174803 TTTGCCGATGCCGAA-AAGGAGTACAAGGAAAAGGGAGACGAGAGTGGTCTTCATATCAT 174861 Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG---------TTCTGGTGTAAA 19610 || | || |||||||| || | || || |||||||| | ||||| || Sbjct 174862 CATTTTCGACGAATTGGATGCTGTGTGCAAACAAAGAGGAAGTGGCGCTGGTGGTGGAAC 174921 Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 ||| || |||| ||| || |||||||| |||||||| | || |||||| |||| || Sbjct 174922 TGGCGTTGGAGACAGTGTCGTAAATCAACTGTTGTCAAAACTCGATGGTGTTGACCAGCT 174981 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730 ||||||||| | | ||||| ||||| ||| | |||| | || || || ||| | Sbjct 174982 CAATAATATTCTTCTCATTGGAATGACCAATCGTATGGATATGATTGATGATGCTTTACT 175041 Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGT 19790 ||||| || || |||||| | | || |||||| || || |||||| || | | Sbjct 175042 CCGACCTGGACGTTTGGAAGTTCATATGGAAATTTCTTTGCCAGATGAAGCCGGCAGGGC 175101 Query 19791 GGAAATTTTAAACATACATACATCAACCATGC 19822 ||||| | || || ||||| || | |||| Sbjct 175102 ACAAATTCTTAAGATTCATACTTCTAAGATGC 175133 >seq9 Length=1850997 Score = 86.0 bits (94), Expect = 5e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090 ||| |||||||| || |||| ||| ||||| ||||| || | || || || | || || Sbjct 38113 AATTGTCATACGAGATGGAATAGCGTGCGGGTTAATGATAAGATCGGGAACAACGCCCTC 38054 Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCGTACATCATTCCACAAGTTCCTTTTTGAGCGGT 115150 ||||| |||||||| || || |||| | || || ||||||||||| || Sbjct 38053 TCTAGTGAAAGGCATGTCCTGTTGCATGTACGTAATACCGATGGTTCCTTTTTGTCCGTG 37994 Query 115151 AAACGATGCAAATTTATCACCAATCTCAGG-TTCTCTGATTTTTCTCAGACGTATCTTCA 115209 | ||| |||||||| |||||||| | ||| ||| || || |||||| || | ||||| Sbjct 37993 ACGCGACGCAAATTTGTCACCAATTTGAGGAATCTTTG-TTGTTCTCATTCGAACCTTCA 37935 Query 115210 C 115210 | Sbjct 37934 C 37934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453553782525