Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq8 150 2e-31 seq27 104 2e-17 >seq8 Length=1964072 Score = 150 bits (166), Expect = 2e-31 Identities = 362/540 (67%), Gaps = 11/540 (2%) Strand=Plus/Minus Query 131546 TTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCA-AACGAACTGTCCAAATTGGG 131604 || |||||| | || || | | || || | || |||| || | ||| ||||| || Sbjct 140936 TTCTCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTG-CCAAACCCGG 140878 Query 131605 ACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAA 131664 ||||||| |||| ||||| || | |||| | || |||| |||||| ||||||||||| | Sbjct 140877 ACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAATAG 140818 Query 131665 ATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAt 131724 ||| || | ||| || ||||| || ||||| | || ||||| | || || || Sbjct 140817 ATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCC-ATGAT 140759 Query 131725 tttttt-CAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCA 131783 | || || || | ||| || |||| ||| |||||||| ||||| | || | || | Sbjct 140758 TCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGA 140699 Query 131784 TTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGC 131840 || || |||||| || ||||||| ||||| | | |||||||| | || | Sbjct 140698 AAGCACCAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTC 140639 Query 131841 GCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGG 131900 | | ||| || | | ||||||| |||||| ||||||| ||||| ||| | | Sbjct 140638 GGAGCATAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAG 140579 Query 131901 CTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATT 131960 | | |||| ||||||||||||| |||||||| ||| | | || || || | || || Sbjct 140578 CACGGATTCTGTGAACGTTGAGACCAATACCACCGGCATTCTTCGAAATCATGGCACAAA 140519 Query 131961 TGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAG 132020 | | | ||||| || ||||| || | |||||| | ||||||| | ||||| | Sbjct 140518 TCTTCAAAGTGTCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCATG 140459 Query 132021 AGGACAACTGT--TGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAA 132078 | || | ||| | ||| | || || || || || | ||| ||| ||| || || || Sbjct 140458 ATGAAAGTTGTGCTTGTGGA--GTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAA 140401 >seq27 Length=788475 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||||||||| ||||| || ||||| || |||||||| || |||| | ||||| Sbjct 516209 ACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCA 516150 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| || | || |||||||||||||| || || | |||||| ||||| Sbjct 516149 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGA 516090 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | || || | | ||||| || | ||| || | || Sbjct 516089 ATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTT 516030 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || || || |||||||||||| Sbjct 516029 CCAGTCAAGGTCTTAACGAAGATTTGCATA 516000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931784661560