Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 246 4e-60 seq3 86.0 8e-12 >seq8 Length=1964072 Score = 246 bits (272), Expect = 4e-60 Identities = 1164/1816 (64%), Gaps = 65/1816 (4%) Strand=Plus/Minus Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427 ||||||||| |||||||| | || ||||||| | | |||||||| | | ||| Sbjct 142026 ATAGTACATTCCGGTCTTCAAACCCAGTTTCCAACCAGCAAAGTGCATAGATGTAATCTT 141967 Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487 | ||| || ||| | |||| | |||||| ||| ||| || |||||| || Sbjct 141966 GCCCATTGTAGGATCCTTCATGTGAATGTTCATCGATTGGGATTGATCGATGAAGGCACC 141907 Query 110488 CCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATA 110544 || | || ||||| | || || | ||| || | ||||||||||| || || Sbjct 141906 ACGATCGGCAGCCATCTGAACGA--TTGTTCG-CTGAGAAATTTCCCAAACAGTCTTGTA 141850 Query 110545 GAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCAC 110604 || |||||||||| ||||||||| | || || |||||||| || ||| ||| Sbjct 141849 AAGGGCCTTGATATCAGCTGGGATATTAGGAATGTTTTGGATGGATCC----GCCATCAG 141794 Query 110605 C-ATGAGA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGA 110660 | |||| | | |||||| | | ||||| ||||| || | |||||| |||| || Sbjct 141793 CGATGATACGGTTCTTCATGTTGTCCGACCAAAGACCCATATCGACGAGGTCCTTGA-GA 141735 Query 110661 GGTGCTTG-TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719 | | | ||||| | || || || || || | | ||| ||||||| Sbjct 141734 AGCCATGGATTGACGACTTGGAATTCTCCAGCAAGAACACGACGAGAGTAAATGTTTGAA 141675 Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779 ||||| ||||| || |||||||| ||| | ||||| | ||| || |||||||| Sbjct 141674 GTGTAAGGTTCGAAACATTCATTGAAACCAAGAATTTGGGATGTGCTAGCAGTTGGCATG 141615 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 ||||| | | ||| ||| |||| || | | ||||||| || ||| | | ||| Sbjct 141614 GGTGCAACGAGGAGAGAGTTGCGAACTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCC 141555 Query 110840 CAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGG 110897 || || | | | || ||| | || |||||||||| | || || | || | || Sbjct 141554 CAATCCCACAAATCA-CTAGGTGTAACAC-CCCACATGTCGTATTGGAGTTCACCCTTGG 141497 Query 110898 ACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTC 110956 | | ||||| || ||| |||||||||| | ||| | | | || | || || | | Sbjct 141496 AGACTGGAGAGCCTTCATAGGTTTCATATGGACCAAGCTCCTTTGCAATCTCGACGGATG 141437 Query 110957 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 111016 || ||| | || || || ||||| || || || | || | | ||| ||||| Sbjct 141436 AGGTCAAGGCA-GCATGGTAGATGGTCTCGAAAATTTGGATGTTGAGGTGCTTAGCTTCT 141378 Query 111017 TCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGACCTTGAACACCCA 111074 || || |||| | || | | | || ||| |||| || ||||| |||||||| | Sbjct 141377 GGAGAGTCGAATG-GAAGTCGGAGAGCCAAGAAAG-CATCAGCAAGACCCTGAACACCGA 141320 Query 111075 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTC 111134 | | ||||||| ||| || | ||| ||| || | ||| || ||| | || Sbjct 141319 CAGCGATAGGTCGGTGACGGAAATTGCTCTTCTTGGCTTCTTGAACTGGGTAATAGTTGA 141260 Query 111135 TGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCAT 111194 ||| |||| ||| | |||| | ||||| || |||| || ||||| || | Sbjct 141259 TGTTGATGATCTTGTTCAAATTTCTAACAACAACCTGAGTGACCTCGTGAAGCTTGTGGA 141200 Query 111195 AATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251 ||||| |||| | ||| ||||| ||||| | |||| | ||||| || ||||| | Sbjct 141199 AATCATAAGTTCC---CTCATTCATGTTGACAAAAGTTGGCAAAGCGATAGAAGCCAAGT 141143 Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311 | ||| ||| |||||| | | |||||| | ||| ||||| ||||||||||| | Sbjct 141142 TACAACAAGCAACCTCATCTGGCGCAGAGTACTCGACAATCTCTGTGCATAAGTTGGAGC 141083 Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCA 111371 | ||| || || | |||||||||||||||||||||||||| ||||| ||||| |||| Sbjct 141082 TGCGAATAGTACCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCA 141023 Query 111372 TGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGC- 111429 || | || | |||||||| || || | | |||||||| | ||||| | | | | | Sbjct 141022 TGAAAGGATTTCCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCT 140963 Query 111430 TGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488 || || | || | ||| | || || |||||| | ||||| || || |||| Sbjct 140962 TGATAGTCTTGC---GACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCGAACT 140906 Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548 | || || | || | | ||| || | || || || | ||||| ||| | | Sbjct 140905 CTTCGCCATAAACATCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAGTCCACTCTC 140846 Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608 || | ||||| |||||||| || || || |||||||||| || | |||||||| | Sbjct 140845 CATTCTTTTCAACACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCAC 140786 Query 111609 -TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 | || ||| | ||||| | || || || || | ||||| ||||| | | || Sbjct 140785 GTGCA-CGAACTTCTTCCTTGCCATGATTCTTGCGCAGATCAAGAAACTCGAAAACGTCA 140727 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTT 111724 || |||||||| ||||| || | |||| || || ||| | ||| |||||| Sbjct 140726 GCATGCCATGGTTCAAGGTAAATAGCGAAAGCACCAGGTCGCTTATTACCACCTTGATCA 140667 Query 111725 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 111784 ||||| | || ||| ||| || || || ||||| || | ||| || | || | || Sbjct 140666 ACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATAGGGACAATGCCGTTGGAGTTTCCG 140607 Query 111785 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT---------GTGCATC 111835 || || || | ||| ||| || | | || |||| || | Sbjct 140606 TTGGTGCC-------GGCGATGTAT--GCACCAGTAGCACGGATTCTGTGAACGTTGAGA 140556 Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 |||||||| || || ||| || || ||||| | | | ||| | || ||||| Sbjct 140555 CCAATACCACCGGCATTCTTCGAAATCATGGCACAAATCTTCAAAGTGTCGTAAATACCA 140496 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | || ||||||||| || |||| |||||||| || | || | | ||| || Sbjct 140495 TCAATACTGTCCTCCTTCATGTCGATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTT 140436 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTA 112014 || ||| |||||| || || | || || |||| ||| | | |||||| || ||| Sbjct 140435 CCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAA-GTACTTGTTTGACATCAAGTTGTA 140377 Query 112015 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACAT 112074 |||||| | || ||||| || || || || || || | || || ||||||| ||| Sbjct 140376 TGTCTCGATAGCACTCTCAATATCATCACCATGAATACCAACGGCAACACGCATGATCAT 140317 Query 112075 GTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGG 112133 | ||||| ||| | |||||||||| ||| |||| || | || |||| || | Sbjct 140316 TTGTTGTGGACGTTCTGCAACTTTGCCATCGAGGCGTAGAAGGTATGATC-TCTCGAGAG 140258 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| || ||||| Sbjct 140257 TCTTGAACCCGAAGTA 140242 >seq3 Length=2715537 Score = 86.0 bits (94), Expect = 8e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||||||||| || || ||||| || ||||| || ||||| || || | ||||||||| Sbjct 2405681 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGGCCATGAGACC 2405740 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | |||| ||| || ||||||||||| ||||| || || Sbjct 2405741 ACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGC 2405800 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAAACCATTTCATTG 122848 || || || | || |||| || |||| || | ||| | | || ||| || | | Sbjct 2405801 AGCGAATGCGACGAGACGTTGAGCAAAGGTAGAG-TTCTTGTCTTGAATCCACTTGACAG 2405859 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 |||| | |||||||| | ||| || || || Sbjct 2405860 CCCAGTCGGCCTTCTTTTTAATGCAAGGAAC 2405890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028035548000