Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 183 4e-41 seq3 107 2e-18 >seq8 Length=1964072 Score = 183 bits (202), Expect = 4e-41 Identities = 860/1343 (64%), Gaps = 32/1343 (2%) Strand=Plus/Minus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| || ||||| | ||| | ||||| || | ||||| || | | |||| Sbjct 142025 TAGTACATTCCGGTCTTCAAACCCAGTTTCCAACCAGCAAAGTGCATAGATGTAATCTTG 141966 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962 | || ||| | |||| | |||||| ||||||||||||||||||| || Sbjct 141965 CCCATTGTAGGATCCTTCATGTGAATGTTCATCGATTGGGATTGATCGATGAAGGCACCA 141906 Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAGA 118020 ||||| || ||||| | || | | ||| || ||||||| |||||| |||| | Sbjct 141905 CGATCGGCAGCCATCTGAACGA--TTGTTCGCTGAGAAATTTCCCAAACAGTCTTGTAAA 141848 Query 118021 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA 118080 || ||| |||||| ||||||||| || |||||||||||||| || | || | Sbjct 141847 GGGCCTTGATATCAGCTGGGATATTAGGAATGTTTTGGATGGATCCGCCATCAGCGATGA 141788 Query 118081 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 118138 | | | |||||| | | ||||| ||||| || | ||| |||| | || ||| Sbjct 141787 TACGGTTCTTCATGTTGTCCGACCAAAGACCCATATCGACGAGGTCCTTGAGAAGCCATG 141728 Query 118139 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGT 118197 |||||| || || || || || || || | ||| || || || | |||| Sbjct 141727 G--ATTGACGACTTGGAATTCTCCAGCAAGAACACGACG-AGAGTAAATGTTTGAAGTGT 141671 Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTG 118257 | || || || || |||||| ||| | ||||||| |||| || || |||||||||| Sbjct 141670 AAGGTTCGAAACATTCATTGAAACCAAGAATTTGGGATGTGCTAGCAGTTGGCATGGGTG 141611 Query 118258 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT 118317 | | ||| || ||| || | || | || | | ||| || ||| | || |||||| | Sbjct 141610 CAACGAGGAGAGAGTTGCGAACTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAAT 141551 Query 118318 CGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGC 118375 | | | | || || | | | |||||| || | ||||| ||| | ||| | Sbjct 141550 CCCACAAATCA-CTAGGTGTAACACC-CCACATGTCGTATTGGAGTTCACCCTTGGAGAC 141493 Query 118376 TGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC--CAAT-TCGGAGCTCGC 118432 ||| || || ||| | || |||||||| || || |||| |||| ||| | | Sbjct 141492 TGGAGAGCCTTCATAGGTTTCATATGGACC---AAGCTCCTTTGCAATCTCGACGGATGA 141436 Query 118433 CTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 118492 | ||| || || || || || || ||||| | || | ||| || || Sbjct 141435 GGTCAAGGCAGCATGGTAGATGGTCTCGAAAATTTGGATGTTGAGGTGCTTAGCTTCTGG 141376 Query 118493 GGAATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 118551 || || || | |||||| | || ||| |||| || ||||| || ||||||| Sbjct 141375 AGAGTCGAATGGAAGTCGGAGAGCCAAGAAAG-CATCAGCAAGACCCTGAACACCGACAG 141317 Query 118552 CAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTAT 118611 | || || || || | | ||| |||| || | || || ||| | || | | Sbjct 141316 CGATAGGTCGGTGACGGAAATTGCTCTTCTTGGCTTCTTGAACTGGGTAATAGTTGATGT 141257 Query 118612 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT 118671 ||| | | | || | |||| | ||||||| |||| || |||||||| | | ||| Sbjct 141256 TGATGATCTTGTTCAAATTTCTAACAACAACCTGAGTGACCTCGTGAAGCTTGTGGAAAT 141197 Query 118672 CAAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 118728 || || | | ||| ||||| ||||| | | || | ||||| || |||| |||| Sbjct 141196 CATAAGTTCC---CTCATTCATGTTGACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTAC 141140 Query 118729 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCT 118788 | || |||||| ||| |||||| | ||| || ||||| ||||| || || Sbjct 141139 AACAAGCAACCTCATCTGGCGCAGAGTACTCGACAATCTCTGTGCATAAGTTGGAGCTGC 141080 Query 118789 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 118848 ||| || || | ||||||||| || ||| |||| || ||||| |||||||||||| Sbjct 141079 GAATAGTACCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGA 141020 Query 118849 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGC--TGG 118906 | || | |||||||| ||||||| || |||||||| | ||| | | ||| || Sbjct 141019 AAGGATTTCCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGA 140960 Query 118907 CACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTC 118966 | | ||| || ||| ||| |||||| | ||||| || || |||||||| Sbjct 140959 TAGTCTTGCG-ACCCTTGCCAGCCTT-CTCGTAACTCTCATAGAGAGCCTCGAACTCTTC 140902 Query 118967 ACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACC 119026 || | |||| | || || | | ||||| | |||| ||| | ||| Sbjct 140901 GCCATAAACATCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAGTCCACTCTCCATT 140842 Query 119027 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACA 119086 || ||||| |||||||| || || || || ||||| | || |||||||||| || Sbjct 140841 CTTTTCAACACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCACGTGC 140782 Query 119087 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 119146 ||| ||||||| | || ||||| |||| || | ||| || | | || || || Sbjct 140781 ACGAACTTCTTCCTTGCCATGATTCTTGCGCAGATCAAGAAACTCGAAAACGTCAGCATG 140722 Query 119147 CCACGGTTCCAGGTACACCGCGA 119169 ||| ||||| ||||| | |||| Sbjct 140721 CCATGGTTCAAGGTAAATAGCGA 140699 >seq3 Length=2715537 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||||||||| |||||||||||||||||||| || ||||| || || | ||||||||| Sbjct 2405681 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGGCCATGAGACC 2405740 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | || || || |||||||| || || || || Sbjct 2405741 ACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGC 2405800 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| || | |||||| | |||||||| Sbjct 2405801 AGCGAATGCGACGAGACGTTGAGCAAAGG 2405829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431296127800