Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq27 185 3e-41 seq2 152 2e-31 seq1 116 1e-20 >seq27 Length=788475 Score = 185 bits (204), Expect = 3e-41 Identities = 479/728 (66%), Gaps = 13/728 (2%) Strand=Plus/Minus Query 349201 TATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGT 349260 ||| || |||||||| ||||| || || |||||||| | | | | | ||||| | | Sbjct 606478 TATTGGTATCGATTTGGGTACCACCTACTCTTGTGTGGGTATCTTCCGTGATGATAGAAT 606419 Query 349261 AGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGA 349320 ||||| || || || || ||||| ||| | || || ||||| | |||||| || || || Sbjct 606418 CGAAATTATCGCCAACGACCAAGGAAACCGTACCACCCCATCCTTCGTTGCTTTCACAGA 606359 Query 349321 AACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATAC 349380 || |||||| |||| || ||| | || || ||||||| || || |||| || || Sbjct 606358 TACCGAGCGTCTGATCGGAGATGCCGCCAAGAATCAAGTCGCCATGAACCCAATCAACAC 606299 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCT 349438 || || ||||||||||| | |||||| | | || | || | | | ||| | Sbjct 606298 CGTCTTCGATGCTAAGCGTTTGATTGGTCGCAAGTTCGCAGATGCTGAGGT--TCAAGCC 606241 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGAC---GGTGATAAACCAATTATT 349495 ||| | || || || || || | || || ||| |||| || ||| | || Sbjct 606240 GATATGAAGCACTTCCCATTCAAGGTCATT------GACCGTGGTGGAAAGCCAGTCATC 606187 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 ||||| || | || || || | || ||||| ||| |||||||| || || ||| | Sbjct 606186 GAGGTCGAGTTCAAGGGCGAGAACAAGCAATTCACACCAGAAGAAATCTCTTCCATGATC 606127 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 || || || |||| || | |||||| || || | |||| ||| || | | ||||| Sbjct 606126 TTGGTCAAGATGAGAGAGACTGCTGAGGCTTACCTCGGTGGAACTGTTAACAACGCTGTC 606067 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 | || || ||||| || || | ||| | || ||| || || || || ||||| | Sbjct 606066 GTCACAGTCCCAGCTTACTTCACCGATTCACAACGTCAAGCCACTAAGGACGCTGGTCTC 606007 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || | || ||||| | || || || || || || || || || ||||| || Sbjct 606006 ATTGCTGGTCTTAACGTTCTCCGTATCATCAACGAGCCTACCGCAGCTGCCATTGCTTAC 605947 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || | || || | || ||| || || |||| || || ||| | ||||| || Sbjct 605946 GGTTTGGACAAGAAGATTGAGGGTGAGCGTAACGTTCTCATCTTCGATCTTGGTGGAGGA 605887 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||| ||||| || || | || | || ||||| || || || || || | || || Sbjct 605886 ACTTTCGATGTCTCTCTCTTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCC 605827 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 ||||| || || | ||||| ||||| || || || | || || || ||||| | Sbjct 605826 GGTGACACTCACTTGGGTGGTGAAGACTTCGACAACAGACTTGTCAATCACTTTGTCGCA 605767 Query 349916 GAATTTAA 349923 ||||| || Sbjct 605766 GAATTCAA 605759 Score = 158 bits (174), Expect = 4e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | ||| | ||||| || ||||| || || | Sbjct 516235 TTTGCATACCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGT 516176 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || ||||||||||| || || ||||||||||| ||||| || |||| Sbjct 516175 AGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGAT 516116 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| || || ||||| ||||| |||| ||| ||||| || |||| ||| |||| Sbjct 516115 CAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGATG 516056 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | || | |||||||| || | || || || || || ||||| Sbjct 516055 ACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Score = 149 bits (164), Expect = 2e-30 Identities = 168/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | ||| || || | ||||| || ||||| || |||||||| | Sbjct 516007 TTTGCATACCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGT 515948 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| |||||||| ||||| || || || | ||| || |||| Sbjct 515947 AGTCGGAGAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGAT 515888 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || ||||| || || || | || |||||||| || | ||||| | Sbjct 515887 CGGGTGGGATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAG 515828 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 ||| |||||||| || | ||||||||||| || || || |||| Sbjct 515827 ATTCGACTTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAA 515783 Score = 127 bits (140), Expect = 6e-24 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || |||||||| || |||||||| |||||||| || | Sbjct 515724 TTTGCATACCACCACGAAGGCGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGT 515665 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||| || || || ||||| |||||||| ||||| || || || | ||| || || | Sbjct 515664 AGTCACTCAAGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGT 515605 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || |||||||| || ||||| || || || | || || || ||||| | ||| | || Sbjct 515604 CGGGGGGAATTCCCTCCTTATCTTGGATCTTTGACTTGACGTTGTCAATGGTATC-GCTG 515546 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | ||| || ||||| || | ||||| || || Sbjct 515545 GATTCGACCTCAAGGGTGATAGTCTTGCCAGT 515514 >seq2 Length=2834403 Score = 152 bits (168), Expect = 2e-31 Identities = 262/379 (69%), Gaps = 6/379 (2%) Strand=Plus/Plus Query 378121 TCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTC 378180 |||| ||||| || ||||| ||||||||| || | | ||| | ||||| Sbjct 1416076 TCAAGACCATCTTCACCATAGACGAATTGAACGATGTCGCCAAGGGAGTTACGGACAGTA 1416135 Query 378181 ATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCA 378240 |||||| | |||| | ||| || | ||||| | ||| || || |||||||||| Sbjct 1416136 CCGTCATATTTTGCCATAACATCCTCGAGAGCTTTGACAAGACGACGTTGAATATAACCA 1416195 Query 378241 GTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAG 378300 |||| ||| || ||||| ||||| || ||||| |||||||| ||||||| |||||| Sbjct 1416196 GTTTCTGCAGTCTTGACTGCGGTATCGATCAAACCTTCACGACCAGCCATTGCGTGGAAG 1416255 Query 378301 AATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCT 378360 || || || ||||| || || || | | | || |||||| ||| ||||| | || Sbjct 1416256 AAGAACTCTGTAGGTGTGAGACCTCTCAGGTAAGAGTTCTCAACAAAGCCTCTCGATTCT 1416315 Query 378361 GGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATT 378420 ||||||| ||||| || || |||| || | || || | || || || | ||||| Sbjct 1416316 GGCGAATAATCATCCTTGGTGAAATGTGGAAGGGTGCGGTACTTGAAACCGAAAGGAATA 1416375 Query 378421 CGTTTTCCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCAATATTTAAA 378477 ||||| || |||||| ||||||| |||| ||||| ||| |||| |||||| | | Sbjct 1416376 CGTTTACCTTCAACAGATTGTTGACCCACAAGGGCAGA---CATCTGAGAAATATTGATA 1416432 Query 378478 TCACTACCTTTAGACCCAG 378496 | |||||| || |||| Sbjct 1416433 GTAGAACCTTTGGAACCAG 1416451 Score = 113 bits (124), Expect = 1e-19 Identities = 504/783 (64%), Gaps = 23/783 (3%) Strand=Plus/Minus Query 349565 ATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTA 349624 ||||||||||||||||||| | || || | | || | | || || || ||||| Sbjct 2396299 ATGAAGGAAATTGCTGAAGTCAAGTTGGGCAAGAAGGTCTCAAAGGCAGTCATCACTGTC 2396240 Query 349625 CCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGG 349684 |||||||| || || || ||| ||| || || || |||||||| |||||| || Sbjct 2396239 CCAGCCTACTTCAACGACAACCAACGTCAAGCTACCAAGGATGCTGGTGCCATTGCCGGT 2396180 Query 349685 TTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGAT 349744 | || || || | || || || || || || ||||| || ||||| || || |||| | Sbjct 2396179 CTTAACGTCCTCCGTATCATCAACGAGCCTACCGCTGCTGCCATTGCTTACGGTCTTGGT 2396120 Query 349745 AAAATGAGTGACCAAGaaaaa----aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || | |||| || | ||| |||| || | ||| | |||||||| ||||| Sbjct 2396119 -GCTGGAAAGTCCAACAAGGAGCGCAATGTTCTCATCTACGATCTCGGTGGTGGAACTTT 2396061 Query 349801 TGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 ||||| || || || |||| | ||| || | || || || || ||||| |||| Sbjct 2396060 CGATGTTTCTCTCCTCAACA-TCCAAGGTGGTGTCTTCACCGTCAAGGCTACTGCCGGTG 2396002 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAAT 349919 | || ||| | || || ||||||| |||| ||| || || || || || | Sbjct 2396001 ACACCCATTTGGGAGGTCAAGATTTCGATACCAACCTCCTTGACCACTTCAAGAAGGAGT 2395942 Query 349920 TTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAA 349979 | | | | | || | || | | | || | || | ||||| || |||| Sbjct 2395941 TCACCAGAAAGACCAAGAAGGACTTGTCCAACGACCCCCGTGCTCTCCGTCGTCTCAGAA 2395882 Query 349980 CTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC--TACCCAAACCTCTATTGAAAT 350037 | || || |||||||||||| | || | || | || | || ||| || | || || Sbjct 2395881 CCGCTTGCGAACGTGCTAAGAGAACCCTCTC--CAACGGTGCCTCCACCACTGTCGAGAT 2395824 Query 350038 TGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096 ||| || |||| | ||||| | |||||| | | || || ||||| | || |||| Sbjct 2395823 TGACTC-CTTGTTCGATGGTGAGGATTTCAATGCTCAAATCACCCGTGCCAGATTCGAAG 2395765 Query 350097 A-ATTA--TGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAG 350153 | ||| | | || ||| | | || |||| ||||| | | || | || | Sbjct 2395764 ACCTTAACTCAAAGG---CTTTCAACGGTACTTTGGAGCCTGTTGCTCAGGTTCTCAAGG 2395708 Query 350154 ATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 |||| || || || | || |||| || | || | || ||||||||||| |||| Sbjct 2395707 ATGCCAACATTGATAAGACCAAGGTTGACGAGATTGTCCTTGTCGGTGGTTCTACCCGTA 2395648 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA- 350272 | |||| | ||||| || | | |||||| ||| |||| |||||| || ||| | Sbjct 2395647 TCCCAAGAATTCAAAAGCTCTTGAGTGAGTTCTTTGATGG-AAAGAA-GTTGGAGAAGAG 2395590 Query 350273 -ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 || || || ||||| ||||||||||| ||||| || ||||| || ||| | || || Sbjct 2395589 CATCAACCCTGATGAGGCTGTTGCATACGGTGCCGCCGTTCAAGCTGGTATCCTTTCCGG 2395530 Query 350332 AAA 350334 ||| Sbjct 2395529 AAA 2395527 Score = 95.1 bits (104), Expect = 4e-14 Identities = 104/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | ||||| ||| ||||||| || ||||| ||| |||||||| || Sbjct 1415389 CGCGGAACACCAAGCGTAACGTTC---TTAGATGAAATACCAGTAAAATGGAAAGTGTTC 1415445 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 | || | ||| || | || |||||||| ||||| || |||| || || ||||| || Sbjct 1415446 AAGGTCATTTGCGTGGCTGGTTCACCAATAGACTGTGCAGCAAGCACACCTACCATCTCA 1415505 Query 377578 CCAGGATTGACAATAGCC 377595 ||||||||||| | |||| Sbjct 1415506 CCAGGATTGACCAAAGCC 1415523 >seq1 Length=6243313 Score = 116 bits (128), Expect = 1e-20 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 ||||| || || ||||| || | || || || || |||||||| |||||||| ||||| Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | |||||| ||||| ||||||||||| || || ||||| || || | || ||||| ||| Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || | ||||| | || || ||||| || | ||||| || || || || || || || Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515244595830515