Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq8 167 3e-36 seq3 147 2e-30 >seq8 Length=1964072 Score = 167 bits (184), Expect = 3e-36 Identities = 842/1334 (63%), Gaps = 46/1334 (3%) Strand=Plus/Minus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 ||| ||||| | ||||| || |||||| || ||| || | || |||| || Sbjct 141687 GTAAATGTTTGAAGTGTAAGGTTCGAAACATTCATTGAAACCAAGAATTTGGGATGTGCT 141628 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 || || ||||||||||| || || ||||| || |||| || || |||||| Sbjct 141627 AGCAGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACTCCGTGTTGCTTGATGGATTG 141568 Query 78654 CTTTAGGCCGTCCCAA------AATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707 ||| | ||||||| || ||| | | | | ||||||||||| ||| || Sbjct 141567 CTTCAAAGAGTCCCAATCCCACAAATCACTAGGTGTAACACCCCACATGTCGTATTGGAG 141508 Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAG 78767 ||||| ||| | || || || | | || || || | || |||||| || | Sbjct 141507 TTCACCCTTGGAGACTGGAGAGCCTTCATAGGTTTCATATGGACCAAGCTCCTTTGCAAT 141448 Query 78768 TTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTC 78827 ||| || | || ||| || ||||| | | |||||| || ||||||| | Sbjct 141447 CTCGACGGATGAGGTCAAGGCAGCATGGTAGATGGTCTCGAAAATTTGGATGTTGAGGTG 141388 Query 78828 GCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTG 78887 || | | |||||| | ||| | ||| || ||| |||| || || ||||| Sbjct 141387 CTTAGCTTCTGGAGAGTCGAATGGAAGTCGGAGAGCCAAGAAAGCATCAGCAAGACCCTG 141328 Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTA 78947 || |||| |||||| |||||||| || | |||||||| ||| | | ||||| Sbjct 141327 AACACCGACAGCGATAGGTCGGTGACGGAAATTGCTCTTCTTGGCTTCTTGAACTGGGTA 141268 Query 78948 AAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAA 79007 | |||| | ||||| ||||| || | || ||| |||| ||||||| | Sbjct 141267 ATAGTTGATGTTGATGATCTTGTTCAAATTTCTAACAACAACCTGAGTGACCTCGTGAAG 141208 Query 79008 TTTGGCGAAATCAAAA------TGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGAT-- 79059 ||| ||||||| || | ||| |||| ||||| || || |||||| Sbjct 141207 CTTGTGGAAATCATAAGTTCCCTCATTCATGTTGACAAAAGTTGG----CAAAGCGATAG 141152 Query 79060 --GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACA 79117 |||| ||| || || ||| || || ||| ||||| || |||||||| | Sbjct 141151 AAGCCAAGTTACAACAAGCAACCTCATCTGGCGCAGAGTACTCGACAATCTCTGTGCATA 141092 Query 79118 AATTAGA----CGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCG 79173 | || || ||| || || || | |||||| ||||| ||||||| ||| || || Sbjct 141091 AGTTGGAGCTGCGA----ATAGTACCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCA 141036 Query 79174 TCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAG 79233 || ||||| |||| | || | || ||||| || || ||||| || ||| Sbjct 141035 TCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAA 140976 Query 79234 ATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGA-------CGTACGTCCG 79286 | | | ||| || | ||||| ||||||| ||| | |||| || Sbjct 140975 AGCTTTTGAGCCTTGATAG---TCTTG---CGACCCT-TGCCAGCCTTCTCGTAACTCTC 140923 Query 79287 GTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCA 79346 || | | | ||| | || ||||| ||||| | || ||||| || |||| ||||| Sbjct 140922 ATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACCCGGACATTCGTTGGGGCA 140863 Query 79347 CATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAG 79406 ||| || ||| || | | ||| ||||| || ||| || || || || ||||||| Sbjct 140862 CATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAATAGATCAGGAATCCACAA 140803 Query 79407 GGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAG 79466 ||| |||||| || || ||| | || || | ||| || ||| ||||| || || Sbjct 140802 GGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGATTCTTGCGCAGATCAAG 140743 Query 79467 AAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTT 79526 ||| || | | ||| || ||||| || || || || || ||||| | ||| ||||| Sbjct 140742 AAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGAAAGCACCAGGTCGCTT 140683 Query 79527 GCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGAT 79586 || || || | || || | ||| ||||||||||||||||||||||| || || || Sbjct 140682 ATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATAGGGACAAT 140623 Query 79587 GCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGC-CCGAATGTTCGAGC 79645 ||||| || | ||||| || ||| ||| || ||| | || | || | | || | Sbjct 140622 GCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAGCACGGATTCTGTGAAC 140563 Query 79646 AGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGT 79705 || || || || || |||| ||| || || || || ||| | || |||| Sbjct 140562 -GTTGAGACCAATACCACCGGCATTCTTCGAAATCATGGCACAAATCTTCAAAGTGTCGT 140504 Query 79706 AGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGT 79765 | || || || || ||| |||||||| ||| |||||||| || | ||| | | Sbjct 140503 AAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCATGATGAAAGTTGT-GCT 140445 Query 79766 TGT-TCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATC 79824 ||| || || || |||||| ||||| | || || |||||| |||| | |||| Sbjct 140444 TGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAAGTACTTGTTTGACATC 140385 Query 79825 AGATCGTACGTCTC 79838 | | ||| ||||| Sbjct 140384 AAGTTGTATGTCTC 140371 Score = 163 bits (180), Expect = 3e-35 Identities = 397/594 (67%), Gaps = 8/594 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCG--CGAGACATA 19173 ||||||| || || || || || ||||| || || | | |||| | ||||||||| Sbjct 140321 TCATGCGTGTTGCCGTTGGTATTCATGGTGATGATATT--GAGAGTGCTATCGAGACATA 140378 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 | || ||||| | |||| |||||| || || | ||||| || ||| || || || Sbjct 140379 CAACTTGATGTCAAACAAGTACTTCACCCATGCCTCCCCGACACTCTTCTCTGCGGGAAC 140438 Query 19234 GA-ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGG 19292 |||| | || | || || ||||| | | |||||||| ||||| ||||| | Sbjct 140439 TCCACAAGCA-CAACTTTCATCATGCTTCCTCATCGACATGAAGGAGGACAGTATTGATG 140497 Query 19293 GCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA 19352 | || ||||| || | ||| || || || || ||| |||| ||||| || Sbjct 140498 GTATTTACGACACTTTGAAGATTTGTGCCATGATTTCGAAGAATGCCGGTGGTATTGGTC 140557 Query 19353 TCCACTGCTCGAATA-TCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411 || || | || | | |||| | | |||| || ||| || || |||||| || Sbjct 140558 TCAAC-GTTCACAGAATCCGTGCTACTGGTGCATACATCGCCGGCACCAACGGAAACTCC 140616 Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471 |||| || ||||| |||||||| || ||||||||||| ||||| || || | || || Sbjct 140617 AACGGCATTGTCCCTATGCTCCGAGTTTTCAACAACACCGCCAGATATGTTGATCAAGGT 140676 Query 19472 GGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531 || || || || | ||||| || ||||| || |||||||| || ||||| | Sbjct 140677 GGTAATAAGCGACCTGGTGCTTTCGCTATTTACCTTGAACCATGGCATGCTGACGTTTTC 140736 Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591 || || || || |||||| ||| || || | || || | || || || |||||| Sbjct 140737 GAGTTTCTTGATCTGCGCAAGAATCATGGCAAGGAAGAAGTTCGTGCACGTGATCTCTTC 140796 Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651 |||||||||||||| || ||||| ||| || ||||| ||| | | ||| ||| Sbjct 140797 TACGCCTTGTGGATTCCTGATCTATTTATGAAGCGTGTTGAAAAGAATGGAGAGTGGACT 140856 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705 || |||||||| ||||||| || || | | || || || ||||| | |||| Sbjct 140857 CTTATGTGCCCCAACGAATGTCCGGGTTTGGCAGATGTTTATGGCGAAGAGTTC 140910 >seq3 Length=2715537 Score = 147 bits (162), Expect = 2e-30 Identities = 317/460 (69%), Gaps = 28/460 (6%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| ||||||||| | || || || ||| ||||| || |||||||| || || ||| Sbjct 2405827 TTTGCTCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTC 2405768 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 |||| ||||||||||| |||||||| |||||| | || || | |||||||||||| Sbjct 2405767 GCATCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACTTTCTCCAACGAA 2405708 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCT 60151 || || ||||| ||||| || ||||| || || ||| || | |||| ||| || | Sbjct 2405707 CTCATCTCCCGTGACGAAGGTCTCCACACCGACTTCGCA-TGCCTCCTCTTTTCCCATC- 2405650 Query 60152 ATTGGAAAAATGCCCTTCCAAGGATATTC--ACAAGAT-TGTTCAGTG-GGCTTGTGAAG 60207 | | | |||| |||||| | | | |||||| | ||| || || ||| Sbjct 2405649 --TCAAGCACCGCCCATCCAAGCA-AGCCGTTCAAGATGTCATCACTGAAGCCGTCGAAA 2405593 Query 60208 TGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAG 60267 | ||| || ||| | || || || |||||||| ||| |||| ||| |||| | Sbjct 2405592 TCGAGCAAGAATTCTTGACCGAGGCTCTTCCATGTGCTCTCTTAGGCATGAACGC----G 2405537 Query 60268 AA----ATGACGCAGTACATTCAGTTTGTCGCGGACCG---CCTCATGGCCCAGTTTGGA 60320 || |||| ||| ||||| |||| || || || || ||||| || ||||| Sbjct 2405536 AATCTCATGAAGCAATACATCGAGTTCGTTGCTGATCGTCTTCTCATCGC----TTTGGG 2405481 Query 60321 GAAGGACCAA-TTTAC-GGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGG 60378 || || || ||||| || || ||||| ||||| | ||||||| |||||| |||| Sbjct 2405480 CAACGAGAAATTTTACAGGTCTG-CCAACCCATTCGATTTCATGGAGAACATCTCATTGG 2405422 Query 60379 AAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 || || |||||||| || |||||| | || || ||||| Sbjct 2405421 CCGGCAAAACCAACTTTTTCGAGAAGAGAGTTGGTGATTA 2405382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521337437200