Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq8 156 5e-33
>seq8
Length=1964072
Score = 156 bits (172), Expect = 5e-33
Identities = 493/756 (65%), Gaps = 20/756 (3%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || ||| | ||||| || ||||| || | ||| ||||| |||
Sbjct 140321 TCATGCGTGTTGCCGTTGGTATTCATGGTGATGATATTGAGAGTGCTATCGAGACATACA 140380
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|||| ||| | |||||||| || || ||| | || || || ||| || || ||
Sbjct 140381 ACTTGATGTCAAACAAGTACTTCACCCATGCCTCCCCGACACTCTTCTCTGCGGGAACTC 140440
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| | || | || |||||||| | | |||||||| ||| || || || |
Sbjct 140441 CACAAGCACAACTTTCATCATGCTTCCTCATCGACATGAAGGAGGACAGTATTGATGGTA 140500
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
| ||||| || | ||| |||||| || || ||| | |||||||| ||| ||
Sbjct 140501 TTTACGACACTTTGAAGATTTGTGCCATGATTTCGAAGAATGCCGGTGGTATTGGTCTCA 140560
Query 53433 AC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | | | ||| ||||||| | || || ||| || || ||||| | || |
Sbjct 140561 ACGTTCACAGAA--TCCGTGCTACTGGTGCATACATCGCCGGCACCAACGGAAACTCCAA 140618
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| || || ||||||||||| || ||||||||||| ||| | || || | || |||||
Sbjct 140619 CGGCATTGTCCCTATGCTCCGAGTTTTCAACAACACCGCCAGATATGTTGATCAAGGTGG 140678
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
| ||||| || | ||||| || ||||| || || ||||| || ||| || | ||
Sbjct 140679 TAATAAGCGACCTGGTGCTTTCGCTATTTACCTTGAACCATGGCATGCTGACGTTTTCGA 140738
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668
|||||| || ||||| |||||| || | ||||| | || ||| ||||| || || |
Sbjct 140739 GTTTCTTGATCTGCGCAAGAATCATGGCAAGGAAGAAGTTCG-TGCACGTGATCTCTTCT 140797
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
|| || |||||||||| || || || ||| | || || ||| | | ||||||
Sbjct 140798 AC-GCCTTGTGGATTCCTGATCTATTTATGAAGCGTGTTGAAAAGAATGGAGAGTGGACT 140856
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788
|| |||||||| ||||| || || || | | ||| || || || ||||| | |
Sbjct 140857 CTTATGTGCCCCAACGAATGTCCGGGTTTGGCAGATGTTTATGGCGAAGAGTTCGAGGCT 140916
Query 53789 ATGTATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGT 53842
| ||| || ||| || | |||| ||| |||| ||||||| |
Sbjct 140917 CTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTCGC------AAGACTATCAAGGCTCAA 140970
Query 53843 GAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTAC 53902
|| | ||| | | || ||| || ||| |||||||||| || | |||| |||
Sbjct 140971 AAGCTTTGGTACTCTATTCTCGAGGCCCAAACCGAGACGGGAAATCCTTTCATGCTTTAC 141030
Query 53903 AAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|| ||| | |||| ||||||| ||||| ||||||
Sbjct 141031 AAAGATGCATGCAACAAGAAGAGTAACCAAAAGAAC 141066
Score = 96.9 bits (106), Expect = 4e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG--AAGAGTCTGATTGACATGAG 55785
|||||| ||||| ||| || ||||| ||| | ||| || | || || | |||
Sbjct 141839 TCAAGGCCCTTTACAAGACTGTTTGGGAAATTTCTCAGCGAACAATCG--TTCAGATGGC 141896
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
||| ||||||||||| | |||||| || ||||| || ||||||| |||| || ||||
Sbjct 141897 TGCCGATCGTGGTGCCTTCATCGATCAATCCCAATCGATGAACATTCACATGAAGGATCC 141956
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| || ||| |||| | | || ||||||||| || ||||| ||| | ||||| ||
Sbjct 141957 TACAATGGGCAAGATTACATCTATGCACTTTGCTGGTTGGAAACTGGGTTTGAAGACCGG 142016
Query 55906 TATGTACTATCTGCGGACC 55924
||||||||| | || |||
Sbjct 142017 AATGTACTATTTACGTACC 142035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212545699000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |