Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 156 5e-33 >seq8 Length=1964072 Score = 156 bits (172), Expect = 5e-33 Identities = 493/756 (65%), Gaps = 20/756 (3%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | ||||| || ||||| || | ||| ||||| ||| Sbjct 140321 TCATGCGTGTTGCCGTTGGTATTCATGGTGATGATATTGAGAGTGCTATCGAGACATACA 140380 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 |||| ||| | |||||||| || || ||| | || || || ||| || || || Sbjct 140381 ACTTGATGTCAAACAAGTACTTCACCCATGCCTCCCCGACACTCTTCTCTGCGGGAACTC 140440 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || | || | || |||||||| | | |||||||| ||| || || || | Sbjct 140441 CACAAGCACAACTTTCATCATGCTTCCTCATCGACATGAAGGAGGACAGTATTGATGGTA 140500 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| || | ||| |||||| || || ||| | |||||||| ||| || Sbjct 140501 TTTACGACACTTTGAAGATTTGTGCCATGATTTCGAAGAATGCCGGTGGTATTGGTCTCA 140560 Query 53433 AC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | | | ||| ||||||| | || || ||| || || ||||| | || | Sbjct 140561 ACGTTCACAGAA--TCCGTGCTACTGGTGCATACATCGCCGGCACCAACGGAAACTCCAA 140618 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || || || ||||||||||| || ||||||||||| ||| | || || | || ||||| Sbjct 140619 CGGCATTGTCCCTATGCTCCGAGTTTTCAACAACACCGCCAGATATGTTGATCAAGGTGG 140678 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | ||||| || | ||||| || ||||| || || ||||| || ||| || | || Sbjct 140679 TAATAAGCGACCTGGTGCTTTCGCTATTTACCTTGAACCATGGCATGCTGACGTTTTCGA 140738 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668 |||||| || ||||| |||||| || | ||||| | || ||| ||||| || || | Sbjct 140739 GTTTCTTGATCTGCGCAAGAATCATGGCAAGGAAGAAGTTCG-TGCACGTGATCTCTTCT 140797 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||||| || || || ||| | || || ||| | | |||||| Sbjct 140798 AC-GCCTTGTGGATTCCTGATCTATTTATGAAGCGTGTTGAAAAGAATGGAGAGTGGACT 140856 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 || |||||||| ||||| || || || | | ||| || || || ||||| | | Sbjct 140857 CTTATGTGCCCCAACGAATGTCCGGGTTTGGCAGATGTTTATGGCGAAGAGTTCGAGGCT 140916 Query 53789 ATGTATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGT 53842 | ||| || ||| || | |||| ||| |||| ||||||| | Sbjct 140917 CTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTCGC------AAGACTATCAAGGCTCAA 140970 Query 53843 GAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTAC 53902 || | ||| | | || ||| || ||| |||||||||| || | |||| ||| Sbjct 140971 AAGCTTTGGTACTCTATTCTCGAGGCCCAAACCGAGACGGGAAATCCTTTCATGCTTTAC 141030 Query 53903 AAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 || ||| | |||| ||||||| ||||| |||||| Sbjct 141031 AAAGATGCATGCAACAAGAAGAGTAACCAAAAGAAC 141066 Score = 96.9 bits (106), Expect = 4e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG--AAGAGTCTGATTGACATGAG 55785 |||||| ||||| ||| || ||||| ||| | ||| || | || || | ||| Sbjct 141839 TCAAGGCCCTTTACAAGACTGTTTGGGAAATTTCTCAGCGAACAATCG--TTCAGATGGC 141896 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||| ||||||||||| | |||||| || ||||| || ||||||| |||| || |||| Sbjct 141897 TGCCGATCGTGGTGCCTTCATCGATCAATCCCAATCGATGAACATTCACATGAAGGATCC 141956 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | || ||| |||| | | || ||||||||| || ||||| ||| | ||||| || Sbjct 141957 TACAATGGGCAAGATTACATCTATGCACTTTGCTGGTTGGAAACTGGGTTTGAAGACCGG 142016 Query 55906 TATGTACTATCTGCGGACC 55924 ||||||||| | || ||| Sbjct 142017 AATGTACTATTTACGTACC 142035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212545699000