Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17 176 5e-39 seq27 158 1e-33 seq1 149 7e-31 >seq17 Length=1064257 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| ||||| || || || || ||||||||||| Sbjct 789551 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 789610 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || ||||||||||||||||| || || ||||| Sbjct 789611 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 789670 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||| |||||||| ||||||| ||||| || | ||||| || Sbjct 789671 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 789730 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||||| ||||| | || |||||||| || ||||| Sbjct 789731 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGCGTCTCCGTGGTGG 789777 >seq27 Length=788475 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| | || || ||||| || ||| | |||||||||||| Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | || |||| ||||| || |||||||| ||||| || || || Sbjct 516061 GATACGATCGACAATGTCAAATCTAAGATTCAAGATAAGGAGGGTATTCCACCTGATCAA 516120 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||||||||| || || |||| || || | ||||||| || Sbjct 516121 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTACAAC 516180 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || | ||| | ||| | ||||| || ||||| Sbjct 516181 ATCCAAAAGGAATCTACCTTACATTTGGTCCTTCGTCTCCGTGGTGG 516227 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || ||||||||||| || |||||||| || || | |||| ||||| || | ||| | Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGTCA 515573 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || || |||||||||||||| || ||||| |||||| | ||||| || || ||| Sbjct 515574 AAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 515633 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||||| ||| ||| | ||||| || | |||||||| || || || ||| Sbjct 515634 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCAT 515693 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || ||||| ||||| Sbjct 515694 CTTGTGCTCCGCCTTCGTGGTGG 515716 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || || ||||| ||||| | || || || || Sbjct 516229 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACAATTACGTTAGAAGTAGAATCGTCA 516288 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||| | || || |||||||||||||| ||||| || ||||| Sbjct 516289 GATACTATTGATAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCTGACCAA 516348 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||| || ||||| | ||||| | | ||||| | || || || Sbjct 516349 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCCGATTACAAC 516408 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | |||||||| ||| || || | || | |||||||| ||||| ||| Sbjct 516409 ATTCAAAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTTCGTGGTGGTCAA 516459 >seq1 Length=6243313 Score = 149 bits (164), Expect = 7e-31 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| ||||| |||||||| || || |||||||| ||||| ||| | ||| Sbjct 2454595 CTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCAT 2454654 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 || ||| | ||| | || || ||||||||||||||||||||||| || || || ||| | Sbjct 2454655 TGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTT 2454714 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || ||||| |||||||| ||||| | ||||| || |||| || || ||||||| Sbjct 2454715 GATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAA 2454774 Query 27594 GG 27595 || Sbjct 2454775 GG 2454776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306799915600