Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq17 161 2e-34 seq27 143 6e-29 seq1 143 6e-29 seq28 96.9 8e-15 seq8 95.1 3e-14 >seq17 Length=1064257 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| |||||||| ||||||||||| || || | ||| || | ||||| || || || Sbjct 789754 GTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGTTG 789695 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || |||||||| | || |||||||| || || | ||| ||||||||||||||||| Sbjct 789694 CTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATCTT 789635 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || ||||||||||| || ||||||||||| ||||| || || ||||| Sbjct 789634 GGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGT 789575 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | |||||| Sbjct 789574 AAGGGTCTTGACGAAGATCTGCAT 789551 >seq27 Length=788475 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| ||||| | |||||| || ||||| || || || || || || | ||||| Sbjct 515994 ACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGT 515935 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || || ||||| || ||||| || | || ||||| || || || | || Sbjct 515934 ACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACC 515875 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| || ||||||||| || || || |||||||||||||| ||| || || || Sbjct 515874 CTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACTTCAAG 515815 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 ||||| |||||||| ||||| ||||| |||| Sbjct 515814 GGTGATGGTCTTTCCGGTGAGGGTCTTGACAA 515783 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| || ||| ||| ||||| ||||| ||||| | |||||| Sbjct 516450 ACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGT 516391 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || || || |||| |||||| ||||| ||||| | |||||||||||||| |||| || Sbjct 516390 TCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACC 516331 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| || || || || || ||| || || | Sbjct 516330 CTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAA 516271 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | ||||| ||||| | ||||| Sbjct 516270 CGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||||||||| || || | | || | |||||||| |||||||| || Sbjct 516197 GTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCA 516138 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || |||||||| || ||||| ||||| |||| || ||||| || || ||||| ||| Sbjct 516137 GCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTG 516078 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || ||||| || || || |||||||| | |||||| |||||||| || | ||| Sbjct 516077 ACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTC 516018 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 516017 TTAACGAAGATTTGCAT 516001 >seq1 Length=6243313 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||||||||| ||||| | || || | ||| || || || ||||| || |||||||| Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | |||||||| || ||||||| ||| ||||||||||||||||| || || || || Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||||||| || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596 >seq28 Length=721443 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 139810 CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAA 139869 |||||||||||||| | || || ||||||||||| ||||| | | ||||| |||| Sbjct 692521 CCAAAGAAGCACGGTCGTGGTGGTCAATCTGCTCTTCGTTTCGCGCGTCTTCGTGAGGAG 692462 Query 139870 AAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAAGAC 139929 ||| | ||||||||| | |||| ||||| || ||| ||||| || |||| || Sbjct 692461 AAGCGACACAACTACGTCCGAAAGGTTGCCGAATTAGCAGTACAGAACTTCATCACAGCA 692402 Query 139930 AACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTC 139989 ||||| || ||||| || | ||||| |||||||| || ||||||| | ||| Sbjct 692401 GACAAGGTCAACGTAGCTGGTCTTATCTTGGCCGGTTCCGCCGATTTCAAGAACGATCTC 692342 Query 139990 CTGGAATCTGACTTTTTTGAC 140010 | ||||| || |||||| Sbjct 692341 AACCAGTCTGATTTGTTTGAC 692321 >seq8 Length=1964072 Score = 95.1 bits (104), Expect = 3e-14 Identities = 191/280 (68%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147 |||| |||||||||||| ||||| || ||||||||||| ||||| || || Sbjct 141071 CCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTT 141012 Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207 ||| ||| | ||| ||| ||||||| | |||||||| || || || |||||| Sbjct 141011 CCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGATAGTCTTG 140952 Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267 | || || | |||||||| | | ||||| ||||||| || ||||| ||| Sbjct 140951 CGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACA 140892 Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACC-GTCTTCCTTC-A 178325 || | | ||| ||| || |||||||| | ||| |||||| || |||| ||| | Sbjct 140891 TCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTT--TTCAA 140834 Query 178326 CTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 | || ||||| || || |||| |||| | ||| ||||| Sbjct 140833 CACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGAA 140794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159144499924325