Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq17 161 2e-34
seq27 143 6e-29
seq1 143 6e-29
seq28 96.9 8e-15
seq8 95.1 3e-14
>seq17
Length=1064257
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| |||||||| ||||||||||| || || | ||| || | ||||| || || ||
Sbjct 789754 GTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGTTG 789695
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| | || |||||||| || || | ||| |||||||||||||||||
Sbjct 789694 CTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATCTT 789635
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || ||||||||||| || ||||||||||| ||||| || || |||||
Sbjct 789634 GGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGT 789575
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || | ||||||
Sbjct 789574 AAGGGTCTTGACGAAGATCTGCAT 789551
>seq27
Length=788475
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||||||||| ||||| | |||||| || ||||| || || || || || || | |||||
Sbjct 515994 ACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGT 515935
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || || ||||| || ||||| || | || ||||| || || || | ||
Sbjct 515934 ACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACC 515875
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| || ||||||||| || || || |||||||||||||| ||| || || ||
Sbjct 515874 CTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACTTCAAG 515815
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104
||||| |||||||| ||||| ||||| ||||
Sbjct 515814 GGTGATGGTCTTTCCGGTGAGGGTCTTGACAA 515783
Score = 140 bits (154), Expect = 8e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| || ||| ||| ||||| ||||| ||||| | ||||||
Sbjct 516450 ACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGT 516391
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| || || |||| |||||| ||||| ||||| | |||||||||||||| |||| ||
Sbjct 516390 TCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACC 516331
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| || || || || || ||| || || |
Sbjct 516330 CTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAA 516271
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || | ||||| ||||| | |||||
Sbjct 516270 CGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || || ||||||||||| || || | | || | |||||||| |||||||| ||
Sbjct 516197 GTAGATTCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCA 516138
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| |||||||| || ||||| ||||| |||| || ||||| || || ||||| |||
Sbjct 516137 GCAAAGATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTG 516078
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| || ||||| || || || |||||||| | |||||| |||||||| || | |||
Sbjct 516077 ACATTGTCGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTC 516018
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 516017 TTAACGAAGATTTGCAT 516001
>seq1
Length=6243313
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
||||||||||| ||||| | || || | ||| || || || ||||| || ||||||||
Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| |||||||| || ||||||| ||| ||||||||||||||||| || || || ||
Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||||||| || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596
>seq28
Length=721443
Score = 96.9 bits (106), Expect = 8e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 139810 CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAA 139869
|||||||||||||| | || || ||||||||||| ||||| | | ||||| ||||
Sbjct 692521 CCAAAGAAGCACGGTCGTGGTGGTCAATCTGCTCTTCGTTTCGCGCGTCTTCGTGAGGAG 692462
Query 139870 AAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAAGAC 139929
||| | ||||||||| | |||| ||||| || ||| ||||| || |||| ||
Sbjct 692461 AAGCGACACAACTACGTCCGAAAGGTTGCCGAATTAGCAGTACAGAACTTCATCACAGCA 692402
Query 139930 AACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTC 139989
||||| || ||||| || | ||||| |||||||| || ||||||| | |||
Sbjct 692401 GACAAGGTCAACGTAGCTGGTCTTATCTTGGCCGGTTCCGCCGATTTCAAGAACGATCTC 692342
Query 139990 CTGGAATCTGACTTTTTTGAC 140010
| ||||| || ||||||
Sbjct 692341 AACCAGTCTGATTTGTTTGAC 692321
>seq8
Length=1964072
Score = 95.1 bits (104), Expect = 3e-14
Identities = 191/280 (68%), Gaps = 4/280 (1%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147
|||| |||||||||||| ||||| || ||||||||||| ||||| || ||
Sbjct 141071 CCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTT 141012
Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207
||| ||| | ||| ||| ||||||| | |||||||| || || || ||||||
Sbjct 141011 CCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGATAGTCTTG 140952
Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267
| || || | |||||||| | | ||||| ||||||| || ||||| |||
Sbjct 140951 CGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACA 140892
Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACC-GTCTTCCTTC-A 178325
|| | | ||| ||| || |||||||| | ||| |||||| || |||| ||| |
Sbjct 140891 TCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAGTCCACTCTCCATTCTT--TTCAA 140834
Query 178326 CTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
| || ||||| || || |||| |||| | ||| |||||
Sbjct 140833 CACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGAA 140794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159144499924325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |