Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq27 111 1e-19
seq1 87.8 1e-12
>seq27
Length=788475
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || |||||||| ||| | || ||||| || |||||| | || ||||| || ||
Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | ||| | || | || || || || ||| | || || |||||
Sbjct 516061 GATACGATCGACAATGTCAAATCTAAGA-TTCAAGATAAGGAGGGTATTCCACCTGATCA 516119
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || ||||| || || || || ||||| | ||||| || || |||||
Sbjct 516120 ACAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTACAA 516179
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| ||||| || || || |||||||| ||
Sbjct 516180 CATCCAAAAGGAATCTACCTTACATTTGGT 516209
>seq1
Length=6243313
Score = 87.8 bits (96), Expect = 1e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679
||||| || ||||| ||||| || || ||||| || || || || ||| | ||||| ||
Sbjct 2454596 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATT 2454655
Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738
|| ||| | || | || | | ||||| || || | || || |||||||| |||||
Sbjct 2454656 GACAATGTCAAGTCCAAGA-TCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTT 2454714
Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798
|| || || || || ||||| || |||| ||| ||| | ||||||||||| |||||
Sbjct 2454715 GATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAA 2454774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007519656540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |