Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq27 111 1e-19 seq1 87.8 1e-12 >seq27 Length=788475 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||| ||| | || ||||| || |||||| | || ||||| || || Sbjct 516001 ATGCAAATCTTCGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGTCATCG 516060 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | ||| | || | || || || || ||| | || || ||||| Sbjct 516061 GATACGATCGACAATGTCAAATCTAAGA-TTCAAGATAAGGAGGGTATTCCACCTGATCA 516119 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||| || || || || ||||| | ||||| || || ||||| Sbjct 516120 ACAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACGTTGTCAGACTACAA 516179 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| || || || |||||||| || Sbjct 516180 CATCCAAAAGGAATCTACCTTACATTTGGT 516209 >seq1 Length=6243313 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 ||||| || ||||| ||||| || || ||||| || || || || ||| | ||||| || Sbjct 2454596 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATT 2454655 Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || ||| | || | || | | ||||| || || | || || |||||||| ||||| Sbjct 2454656 GACAATGTCAAGTCCAAGA-TCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTT 2454714 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || || || || || ||||| || |||| ||| ||| | ||||||||||| ||||| Sbjct 2454715 GATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAA 2454774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007519656540