Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq27 134 3e-26
seq17 134 3e-26
seq1 120 7e-22
>seq27
Length=788475
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| || ||| || ||||| | |||||||||| | ||
Sbjct 516450 ACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAGGGT 516391
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| || || || | |||||| || || ||||| | |||||||||||| || ||||||||
Sbjct 516390 TCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACC 516331
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || || || || ||||| | ||| || |||||
Sbjct 516330 CTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAA 516271
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || ||||| || ||||| || || | || | ||||||
Sbjct 516270 CGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 132 bits (146), Expect = 1e-25
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||||||| | ||| || || || || || || | |||||| |||| | ||
Sbjct 515994 ACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGAGAGGGT 515935
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || || ||||| || ||||| || | || ||||| ||||| || |||||
Sbjct 515934 ACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGGGATACC 515875
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| |||||||||||| ||| ||| ||||||||||| || | ||| || || |
Sbjct 515874 CTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGACTTCAAG 515815
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| ||||| || ||
Sbjct 515814 GGTGATGGTCTTTCCGGT 515797
Score = 118 bits (130), Expect = 3e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || ||||| ||||| || || || ||||| | ||||| || ||| ||
Sbjct 515711 ACGAAGGCGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGT 515652
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || || ||||| || ||||| || | || ||||||||||| ||||| ||
Sbjct 515651 GCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGAATTCC 515592
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| |||||||||||| ||| || || ||||| || || ||| || || |
Sbjct 515591 CTCCTTATCTTGGATCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAG 515532
Query 225672 CGTGATCGTCTTGCCCGTCA 225691
||||| |||||||| ||||
Sbjct 515531 GGTGATAGTCTTGCCAGTCA 515512
>seq17
Length=1064257
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || | ||| || ||||| || ||||||| ||||| |||| | |||
Sbjct 789772 ACGGAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGT 789713
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || || ||||| ||||||||||| | ||| ||||||||||| || || ||
Sbjct 789712 ACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCC 789653
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||||||||| || | || || || |
Sbjct 789652 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAG 789593
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||||||| | || || | ||| | |||||
Sbjct 789592 GGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551
>seq1
Length=6243313
Score = 120 bits (132), Expect = 7e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||||| |||||||| | | ||| | || || || || ||||| |||||||||||
Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| |||||||| ||||| ||||| || |||||||| |||||||| ||| ||| ||
Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| |||| || || || | ||||| |||||||||||
Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 2454611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192523483950470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |