Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8 325 6e-84 seq3 122 1e-22 >seq8 Length=1964072 Score = 325 bits (360), Expect = 6e-84 Identities = 1304/2037 (64%), Gaps = 51/2037 (3%) Strand=Plus/Minus Query 75407 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 75466 ||||||| ||||||||| || || || | |||||| |||| || || ||||| | Sbjct 142034 GTACGTAAATAGTACATTCCGGTCTTCAAACCCAGTTTCCAACCAGCAAAGTGCATAGAT 141975 Query 75467 GTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 75526 || | ||| | ||||| || ||||| |||||||| || |||||||||| Sbjct 141974 GTAATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATCGATTGGGATTGATCGATG 141915 Query 75527 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 75586 || || || | ||| || ||||| | | || || |||| ||||||||||| ||| Sbjct 141914 AAGGCACCACGATCGGCAGCCATCTGAACGATTGTTCGCTGAGAAATTTCCCAAACAGTC 141855 Query 75587 TTGAAAACTTGTTTGATATCATCTGGAAGATTTGTA---TTTTGAATGGATCCGCCATCA 75643 ||| ||| ||||||||| |||| | ||| | | ||||| ||||||||||||||| Sbjct 141854 TTGTAAAGGGCCTTGATATCAGCTGGGATATTAGGAATGTTTTGGATGGATCCGCCATCA 141795 Query 75644 GATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGG 75703 | || || ||||| || | || ||| | | ||| | | | || Sbjct 141794 GCGATGATACGGTTCTTCATGTTGTCCGACCAAAGACCCATATCGACGAGGTCCTTGAGA 141735 Query 75704 AGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTG 75763 || ||||| || | ||| |||||||||| | || | |||| |||||| || Sbjct 141734 AGCCATGGATTGACGACTTGGAATTCTCCAGCAAGAACACGACGAGAGTAAATGTTTGAA 141675 Query 75764 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATA 75823 || || ||||| | | |||||||| || | |||||| | || |||||| ||||| Sbjct 141674 GTGTAAGGTTCGAAACATTCATTGAAACCAAGAATTTGGGATGTGCTAGCAGTTGGCATG 141615 Query 75824 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 75883 ||||| || | | | || | | || ||| |||| | || | | | | | Sbjct 141614 GGTGCAACGAGGAGAGAGTTGCGAACTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCC 141555 Query 75884 CAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTA 75943 |||||||| | ||| ||| |||| |||| | |||||||| || || ||| Sbjct 141554 CAATCCCACAAATCACTAGGTGTAACACCCCACATGTCGTATTGGAGTTCACCCTTGGAG 141495 Query 75944 GCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAA-CTCGC 76002 | || || | ||| ||||| || | || |||| || |||| |||| Sbjct 141494 ACTGGAGAGCCTTCATAGGTTTCATATGGACCA--------AGCTCCTTTGCAATCTCGA 141443 Query 76003 C--------TCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC 76054 | || || ||| | | || || || |||||||| | | || || | | Sbjct 141442 CGGATGAGGTC-AAGGCAGCATGGTAGATGGTCTCGAAAATTTGGATGTTGAGGTGCTTA 141384 Query 76055 GCTTCAAGACTATCAAAAGGATAATGTAAAAG--AATAAATGCATCTGCTAGTCCCTGAA 76112 ||||| || || || ||| | | | || || ||| ||||| || || ||||||| Sbjct 141383 GCTTCTGGAGAGTCGAATGGA-AGTCGGAGAGCCAAGAAA-GCATCAGCAAGACCCTGAA 141326 Query 76113 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAAT 76172 | || | | | ||||||| || | |||| | | |||||| ||| ||||||| Sbjct 141325 CACCGACAGCGATAGGTCGGTGACGGAAATTGCTCTTCTTGGCTTCTTGAACTGGGTAAT 141266 Query 76173 AATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTT 76232 | || || | || || || || | |||||| ||||| || | | || || | || | Sbjct 141265 AGTTGATGTTGATGATCTTGTTCAAATTTCTAACAACAACCTGAGTGACCTCGTGAAGCT 141206 Query 76233 TGAGAAAATCAAATTTTCCATCTATCA------CAAACATATTAAGAGCTATAGATGCTA 76286 || | |||||| | |||| || ||| |||| | | ||| ||||| || | Sbjct 141205 TGTGGAAATCATAAGTTCCCTCATTCATGTTGACAAAAGTTGGCAAAGCGATAGAAGCCA 141146 Query 76287 GATTACAAACGGCTACCTCAT-TAGCATTGGCA---TATTGTATTATCTCCGTGCATAGA 76342 |||||| || ||||||| | || ||| || | | ||||| ||||||| Sbjct 141145 AGTTACAACAAGCAACCTCATCTGGC----GCAGAGTACTCGACAATCTCTGTGCATAAG 141090 Query 76343 TTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTA 76402 || | ||||| ||||| || | |||||| ||||| ||||| |||| || || Sbjct 141089 TTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTG 141030 Query 76403 TAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT 76462 ||||| | || ||| |||| || || | || | |||| |||||| | ||| | | Sbjct 141029 TAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGCCTCGAGAATAGAGTACCAAAGCTTT 140970 Query 76463 CTAGCTTTTATTATAGATTTGTATCGCTTCTCT--CTT-TCATAT-TGTG-TATATAACC 76517 ||| || || || ||| | ||| | ||| || || | | || | | || Sbjct 140969 TGAGCCTTGAT---AGTCTTGCGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCC 140913 Query 76518 GTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATG 76577 || || || || || ||||||| ||||||| |||||||| || || ||||| | | Sbjct 140912 --TCGAACTCTTCGCCATAAACATCTGCCAAACCCGGACATTCGTTGGGGCACATAAGAG 140855 Query 76578 ACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 76637 |||||| |||| | | ||| || |||||||| |||||||| ||||| | || | Sbjct 140854 TCCACTCTCCATTCTTTTCAACACGCTTCATAAATAGATCAGGAATCCACAAGGCGTAGA 140795 Query 76638 ATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCA 76697 | ||||| || | | | |||||| || || |||||| ||||| || ||||| | Sbjct 140794 AGAGATCACGTGCACGAACTTCTTCCTTGCCATGATTCTTGCGCAGATCAAGAAACTCGA 140735 Query 76698 TAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTC 76757 || |||| |||||||||||| || || || || | | |||| ||||| |||||||| | Sbjct 140734 AAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGAAAGCACCAGGTCGCTTATTACCAC 140675 Query 76758 CCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAG 76817 | ||||| | ||||||||| ||||| || |||||| | ||| || | ||||||||| | Sbjct 140674 CTTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATAGGGACAATGCCGTTGG 140615 Query 76818 ATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGC 76877 | | || || || || | || || ||| ||||| || | || || | Sbjct 140614 AGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAGCACGGATTCTGTGAACGTTGAGAC 140555 Query 76878 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCT 76937 | || || || || | || || || | ||||| ||||| ||||| || || || | Sbjct 140554 CAATACCACCGGCATTCTTCGAAATCATGGCACAAATCTTCAAAGTGTCGTAAATACCAT 140495 Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997 | ||||| || ||| |||||| | || || || || | ||| || ||||| Sbjct 140494 CAATACTGTCCTCCTTCATGTCGATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTTC 140435 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057 | ||| || | ||| || || ||||| ||||| | || | || | | ||||||| Sbjct 140434 CCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAAGTACTTGTTTGACATCAAGTTGTATG 140375 Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 | || ||| | || ||||| |||||| || || || |||||||| | ||| | Sbjct 140374 TCTCGATAGCACTCTCAATATCATCACCATGAATACCAACGGCAACACGCATGATCATTT 140315 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 | || || |||||| || || || | | | ||||||| | || | ||| | Sbjct 140314 GTTGTGGACGTTCTGCAACTTTGCCATCGAGGCGTAGAAGGTATGATCTCTCGAGAGTCT 140255 Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGT 77237 | || || || || | ||| ||||||| || || | |||| | || || |||| | Sbjct 140254 TGAACCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCAGAGTTGAGTTCCT 140195 Query 77238 CCTTATATTTGGTAACAATATCCATGACAGTGGTAG-AAATAATTGGAGATCGTATTCCA 77296 ||| || | | | || || | | | | | | ||| || |||||| | | ||| Sbjct 140194 CCTCATGTCTCATGAC-GCATTCGTAAGTTTCCTTGCTAATCATAGGAGATGGGGTGCCA 140136 Query 77297 TTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTT 77356 ||| | || || || | |||| || || |||| | |||| |||| || ||| Sbjct 140135 TTTCTTGGGTTTGTGTATTGGTATAAATCGCGGATAACGTGGGAAAATTGTTTCTTGGTT 140076 Query 77357 TCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGT 77413 | ||||| || ||||| || || || | |||||||||||| ||||| || |||||| Sbjct 140075 TGTTTGTGGAGGTTCGAGACAGCAATACGAGCAGCTAGAATGGCATAATCTGGATGT 140019 >seq3 Length=2715537 Score = 122 bits (134), Expect = 1e-22 Identities = 298/445 (67%), Gaps = 10/445 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| ||||| || | ||||||||||| || |||||||| ||||||| || || Sbjct 2405376 TTTTGGTAATCACCAACTCTCTTCTCGAAAAAGTTGGTTTTGCCGGCCAATGAGATGTTC 2405435 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTC--TGAAA 46456 ||||| ||||| || || || | | | |||| ||| | || || | ||| | Sbjct 2405436 TCCATGAAATCGAATGGGTTGGCAGACCTGTAAAATTTCTCGTTGCCCAAAGCGATGAGA 2405495 Query 46457 TCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCAT-TTCACAATTCATTCCTATG 46515 || | ||| |||||||| || || || ||||| | ||| | ||||| |||| | Sbjct 2405496 --AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGATTCGCG-TTCATGCCTAAG 2405552 Query 46516 AGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATT 46575 || || |||||||| || | || ||||| || || ||| || || | || Sbjct 2405553 AGAGCACATGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCAGTGATG 2405612 Query 46576 ATCGATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATG 46633 | || || || | || || ||| | ||| | | ||| ||| | | |||| Sbjct 2405613 AC--ATCTTGAACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAAAAGAGGAGGCATG 2405670 Query 46634 CAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAG 46693 | || || || || ||||| || | || | |||||| || || || || || | Sbjct 2405671 CGAAGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTAAGTCCGG 2405730 Query 46694 GCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGC 46753 ||| || |||||||| |||||||| || |||| ||||| ||||| || ||||| || | Sbjct 2405731 CCATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATAC 2405790 Query 46754 CTTCTACAGCCGCGAATGCGACAAG 46778 |||| || || ||||||||||| || Sbjct 2405791 CTTCAACGGCAGCGAATGCGACGAG 2405815 Score = 107 bits (118), Expect = 3e-18 Identities = 200/293 (68%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950 || || | |||||| || || | |||| || |||| ||||||||||| || || Sbjct 2405990 TCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTCAGAATGAATGTTCTCCATCATG 2406049 Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010 || || || ||||| || |||||||| || | || || || || || ||||| || Sbjct 2406050 ATTTGGAAACCGTAGAAGCATCTTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCT 2406109 Query 47011 GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATA 47070 ||| |||||||| || ||||| ||| || || || ||||| | || || || Sbjct 2406110 ACCAAGTTCTCATTGACAATTCCGTCAGATGCTGCGAAGAATGCGAGAACGTGCGAGATG 2406169 Query 47071 AAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCT 47127 || || ||||| | | ||| || |||||||| | | ||| ||||| | ||| Sbjct 2406170 AAGTAGCGCTCATCATCATTGAGTCTGTTGTTCCAGTCGTGAAGATCCTTTGACAAATCG 2406229 Query 47128 ACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 | ||||| || |||||||| || |||||||| || || ||||| | ||| || Sbjct 2406230 ATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACATCTGCCAGAT 2406282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929899601600