Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq27 190 4e-43 seq17 172 1e-37 seq1 134 3e-26 seq5 95.1 3e-14 >seq27 Length=788475 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| |||||| || ||| ||||||||||||||||| | Sbjct 516228 ACCACCACGGAGACGAAGGACCAAATGTAAGGTAGATTCCTTTTGGATGTTGTAGTCTGA 516169 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||| || || || || || |||||||| | ||| ||||| ||| || Sbjct 516168 CAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGG 516109 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||| ||||| ||||| | ||| || | ||||| || ||||| | || || Sbjct 516108 AATACCCTCCTTATCTTGAATCTTAGATTTGACATTGTCGATCGTATCCGATGACTCAAC 516049 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || ||||| ||||||||||| || ||||| Sbjct 516048 CTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATTTGCAT 516001 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||||| || ||||| |||||||| || | Sbjct 516456 ACCACCACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGA 516397 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||| ||||| | || || || ||||||||||| |||||||||||| || Sbjct 516396 AAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGG 516337 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || ||| |||| ||||| || || | ||| || Sbjct 516336 AATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTAC 516277 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || |||||||| ||||| ||||| || || || ||||| Sbjct 516276 TTCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 154 bits (170), Expect = 3e-32 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| ||||| || || ||||| | ||| || ||||| |||||||||||| Sbjct 515717 ACCACCACGAAGGCGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACT 515658 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||| |||||||| ||||| || ||||| || |||||||| |||||||| | Sbjct 515657 CAAG-GTGCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGG 515599 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| |||||||| ||||||||||||| || ||| | || || || || | ||||| Sbjct 515598 GAATTCCCTCCTTATCTTGGATCTTTGACTTGACGTTGTCAATGGTATCGCTGGATTCGA 515539 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | || || ||||| ||||| || |||| Sbjct 515538 CCTCAAGGGTGATAGTCTTGCCAGTCA 515512 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || |||| || | || || || || || |||||||| | Sbjct 516000 ACCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCGGA 515941 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| ||||| || ||||| || |||||||| ||||| || || Sbjct 515940 GAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATCGGGTGG 515881 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| ||||||||||||| || || ||||||| ||||| |||| |||||| Sbjct 515880 GATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGATTCGAC 515821 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| ||||| || || | ||||| || Sbjct 515820 TTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 515785 >seq17 Length=1064257 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | |||| || | ||| || ||||||||||||||||| | Sbjct 789778 ACCACCACGGAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGA 789719 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| ||||| || || || |||||||| || |||||||| || Sbjct 789718 AAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGG 789659 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| |||||||||| || || Sbjct 789658 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAAC 789599 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 789598 CTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 789551 >seq1 Length=6243313 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||||||||| || | || || || || ||||| ||||| || || || |||||| Sbjct 2454774 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 2454715 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 ||||||||||| || ||||| ||||||||||| |||||||| | || || | || Sbjct 2454714 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2454655 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| || | ||||| || || ||||| ||||| ||||| | ||||| ||||| Sbjct 2454654 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 2454596 >seq5 Length=2570428 Score = 95.1 bits (104), Expect = 3e-14 Identities = 157/225 (70%), Gaps = 10/225 (4%) Strand=Plus/Plus Query 316621 GGTTCGTAATGGATGATAGAAGTACAGACAGCATCGAGGAAACCAGAATCGTGTGATACA 316680 ||||||||||| |||| ||||| || | || ||||| ||||| ||||| || || Sbjct 1038480 GGTTCGTAATGATAGATATCGGTACAAACTTCGTCCAGGAATCCAGAGTCGTGAGAAACG 1038539 Query 316681 ATCACACATGAAACGCCTTTTAGGTT---GAC--CAGATAGTCGATCAGCCAGCTCACAT 316735 |||| || | || ||| ||| ||| || ||| || ||||| | || | Sbjct 1038540 ATCAAACTGGTAA-----TTTCGGTGTGAGACTTCAAATACTCTTGTAGCCATTTGACGT 1038594 Query 316736 TCGACACAGAAAGATGGTTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCA 316795 | | ||| | ||||||||| ||||||||||| || || | | || | || || || Sbjct 1038595 TGGCAACATCCAAATGGTTGGTAGGTTCGTCAAGAAGAAGGACATCAGCCTTCATCAACA 1038654 Query 316796 TAGCGCGTGCGAGAGCAAGCTTCATTTTCCACCCCCCGGAAAGAG 316840 |||| | || |||||||||||||| ||||| || |||||||||| Sbjct 1038655 TAGCTCTGGCCAGAGCAAGCTTCATCTTCCAACCTCCGGAAAGAG 1038699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046732427270270