Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq27 129 4e-25 seq17 125 5e-24 seq1 114 9e-21 >seq27 Length=788475 Score = 129 bits (142), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCG 44185 ||||| ||| || |||||||||||||| ||||||||||||| || || || |||| Sbjct 516438 CACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAG--GGTTCTGCCGTCC 516381 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 |||| |||||| || ||||||||||| || || || || | || | ||| ||||| ||| Sbjct 516380 TCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCC 516321 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||| | | | || || || | ||||| || || | |||||| ||| Sbjct 516320 TGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTC 516261 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | |||||| || ||||||||||| Sbjct 516260 TTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229 Score = 107 bits (118), Expect = 1e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||||||| |||| |||||| || |||||| || || ||||| Sbjct 516006 TTGCATACCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTA 515947 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| ||| || | || || || ||||| ||||| || ||||||||||| ||||| Sbjct 515946 GTCGGAGAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATC 515887 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | ||| ||||| || ||||| ||| | | | |||||||| | || Sbjct 515886 GGGTGGGATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGA 515827 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 ||| || || | || || |||||||| ||||||||||| || Sbjct 515826 TTCGACTTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 515785 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||||||||||||||| || | | ||| | || || |||||||| || |||||| Sbjct 516191 TCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 516132 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATG 44264 || | |||||| ||||| | || | ||| ||||| || ||||| || || || Sbjct 516131 ATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTGACATTG 516072 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || || || | || || ||||||| || || |||||||| || | |||||| | Sbjct 516071 T--CGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAA 516014 Query 44325 CGAAGATTTGCAT 44337 ||||||||||||| Sbjct 516013 CGAAGATTTGCAT 516001 >seq17 Length=1064257 Score = 125 bits (138), Expect = 5e-24 Identities = 159/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 |||||||| |||||| ||| |||||||||||||||||| |||| || || | || Sbjct 789763 CAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATC 789704 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || || ||||| || || |||||||| ||||| || || | || | || ||||| || Sbjct 789703 CTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTC 789644 Query 44245 CGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 | ||||| ||| || ||| | |||||||| | || || ||||| | || || Sbjct 789643 CTGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 789586 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 || || ||||| |||||||| |||||||| ||||||| Sbjct 789585 GTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGA 789549 >seq1 Length=6243313 Score = 114 bits (126), Expect = 9e-21 Identities = 137/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 ||||||||||||||||||| | ||| || |||| || || ||||| || || |||| Sbjct 2454776 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 2454717 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||||||| || ||||| | ||| | || ||||| ||| ||||| ||| || ||| Sbjct 2454716 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2454657 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 2454656 --CAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 2454599 Query 44326 GAAG 44329 |||| Sbjct 2454598 GAAG 2454595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988184371585