Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq27 129 4e-25
seq17 125 5e-24
seq1 114 9e-21
>seq27
Length=788475
Score = 129 bits (142), Expect = 4e-25
Identities = 157/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCG 44185
||||| ||| || |||||||||||||| ||||||||||||| || || || ||||
Sbjct 516438 CACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAAAG--GGTTCTGCCGTCC 516381
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
|||| |||||| || ||||||||||| || || || || | || | ||| ||||| |||
Sbjct 516380 TCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGAATACCCTCCTTGTCC 516321
Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
|||||| ||| | | | || || || | ||||| || || | |||||| |||
Sbjct 516320 TGGATCTTCGACTTGACGTTATCAATAGTATCTGACGATTCTACTTCTAACGTAATTGTC 516261
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | |||||| || |||||||||||
Sbjct 516260 TTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 107 bits (118), Expect = 1e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | ||||||| |||| |||||| || |||||| || || |||||
Sbjct 516006 TTGCATACCACCACGAAGTCTCAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTA 515947
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||| ||| || | || || || ||||| ||||| || ||||||||||| |||||
Sbjct 515946 GTCGGAGAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGATC 515887
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| || | ||| ||||| || ||||| ||| | | | |||||||| | ||
Sbjct 515886 GGGTGGGATACCCTCCTTATCTTGGATCTTTGACTTGACATTATCGATGGTGTCAGAAGA 515827
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
||| || || | || || |||||||| ||||||||||| ||
Sbjct 515826 TTCGACTTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 515785
Score = 100 bits (110), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||||||||||||||| || | | ||| | || || |||||||| || ||||||
Sbjct 516191 TCCTTTTGGATGTTGTAGTCTGACAACGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 516132
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATG 44264
|| | |||||| ||||| | || | ||| ||||| || ||||| || || ||
Sbjct 516131 ATAAGACGCTGTTGATCAGGTGGAATACCCTCCTTATCTTGAATCTTAGATTTGACATTG 516072
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | || || || | || || ||||||| || || |||||||| || | |||||| |
Sbjct 516071 T--CGATCGTATCCGATGACTCAACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAA 516014
Query 44325 CGAAGATTTGCAT 44337
|||||||||||||
Sbjct 516013 CGAAGATTTGCAT 516001
>seq17
Length=1064257
Score = 125 bits (138), Expect = 5e-24
Identities = 159/217 (73%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|||||||| |||||| ||| |||||||||||||||||| |||| || || | ||
Sbjct 789763 CAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATC 789704
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| || ||||| || || |||||||| ||||| || || | || | || ||||| ||
Sbjct 789703 CTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTC 789644
Query 44245 CGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302
| ||||| ||| || ||| | |||||||| | || || ||||| | || ||
Sbjct 789643 CTGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 789586
Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
|| || ||||| |||||||| |||||||| |||||||
Sbjct 789585 GTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGA 789549
>seq1
Length=6243313
Score = 114 bits (126), Expect = 9e-21
Identities = 137/184 (74%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
||||||||||||||||||| | ||| || |||| || || ||||| || || ||||
Sbjct 2454776 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 2454717
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||||||| || ||||| | ||| | || ||||| ||| ||||| ||| || |||
Sbjct 2454716 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2454657
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| ||
Sbjct 2454656 --CAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 2454599
Query 44326 GAAG 44329
||||
Sbjct 2454598 GAAG 2454595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988184371585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |