Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq17 150 4e-31 seq27 105 2e-17 >seq17 Length=1064257 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || ||||| |||||||||||||| || || ||| Sbjct 789554 CAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGAC 789613 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || |||||||| || ||||| || Sbjct 789614 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAACAG 789673 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| ||||| || || || ||||| | |||||| |||| || ||| || Sbjct 789674 CGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAACATC 789733 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||| || || || || || | || ||| | ||| Sbjct 789734 CAAAAGGAGTCCACCCTTCACTTGGTGTTGCGTCTC 789769 >seq27 Length=788475 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAG 177992 || || || ||||| ||||| || |||||||| || || ||| || ||||||||||| Sbjct 515785 GTCAAGACCCTCACCGGAAAGACCATCACCCTTGAAGTCGAATCTTCTGACACCATCGAT 515844 Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052 || ||||| |||||| || || || || || ||||| || || || || || | || Sbjct 515845 AATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAGCGTTTGATT 515904 Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112 ||||||||||| || || || ||||| | || || |||| || || | || || || Sbjct 515905 TTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCCGACTACAATATTCAGAAGGAG 515964 Query 178113 TCAACACTGCATCTTGTTTTGAGACT 178138 || || || || | || ||||||| Sbjct 515965 TCGACCCTTCACTTGGTCCTGAGACT 515990 Score = 98.7 bits (108), Expect = 2e-15 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||||| ||||| ||| | || ||||| || |||||||| | Sbjct 515514 ACTGGCAAGACTATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGTCA 515573 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| || || || || ||||| || || ||||| || || | || ||||||||||| Sbjct 515574 AAGATCCAAGATAAGGAGGGAATTCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 515633 Query 178065 CAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 || || || ||||| | || |||| || || ||| | ||||| || || || || || Sbjct 515634 CAACTTGAGGATGGTCGCAC-CTTGAGTGACTACAACATTCAAAAGGAGTCTACGCTCCA 515692 Query 178124 TCTTGT 178129 |||||| Sbjct 515693 TCTTGT 515698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203723411482970