Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31]
505 sequences; 54,948,206 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq17 123 2e-23
seq27 111 1e-19
seq1 89.7 5e-13
>seq17
Length=1064257
Score = 123 bits (136), Expect = 2e-23
Identities = 169/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || ||||| ||||||| || || ||| |||||| || ||||| |||||
Sbjct 789781 ACCACCACCACGGAGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTC 789722
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
||| || || || | || || || ||||| || ||||| |||| ||||||||||| |
Sbjct 789721 GGAAAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGG 789662
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809
|| | | |||||||||| ||| || ||| || | || | ||||| |||
Sbjct 789661 TGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCCGAAGAC 789604
Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| ||||| | || || ||||| ||||| || ||||| ||||| |||||||||
Sbjct 789603 TCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 789550
>seq27
Length=788475
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| ||||| ||||||||||| |||||||| || |||||
Sbjct 516455 CCACCACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAATCGGAA 516396
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| | |||| || | |||||| || || || |||| || |||||||| | |||
Sbjct 516395 AGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCAGGTGGA 516336
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| ||| | | ||| || ||| || ||
Sbjct 516335 ATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTATCAATAGTATCTGACGATTCTAC 516277
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | ||| || || ||||| |||| ||||| || || || |||||
Sbjct 516276 TTCTAACGTAATTGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 516229
Score = 95.1 bits (104), Expect = 1e-14
Identities = 146/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||| ||||| ||||| |||||| |||||||| |||||
Sbjct 515716 CCACCACGAAGGCGGAGCACAAGATGGAGCGTAGACTCCTTTTGAATGTTGTAGTCACTC 515657
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || || ||||| |||||||| |||| ||||||||||| | ||||
Sbjct 515656 AAGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGA 515597
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||| || ||| ||| ||| ||| | | | || ||||| || || ||
Sbjct 515596 ATTCCCTCCTTATCTTGGATCTTTGACTT-GACGTTGTCAATGGTATCGCTGGATTCGAC 515538
Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840
||| | || || || || || ||||
Sbjct 515537 CTCAAGGGTGATAGTCTTGCCAGTCA 515512
>seq1
Length=6243313
Score = 89.7 bits (98), Expect = 5e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 85799 TCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGT 85858
||||||||| || |||||||| || ||| ||| ||| || ||| |||||||| ||
Sbjct 5359594 TCGTATCGCCCCACGTTCCGGACTTGCCTCCAAACACATGATTGACACTGGCGCCGGTGT 5359535
Query 85859 CATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGAAGAGGA 85918
||||||||||| ||||| ||| | || | | | ||||||||||||||||| ||||
Sbjct 5359534 AATCGACGCCGATTACCGGGGACAGGTAAAGGTACTCCTCTTCAACCACGGCGAGAAGGA 5359475
Query 85919 TCTGGTCGTGAGGCGAGGAGACAAGGTGGCCCAGTTCAT 85957
| | | |||| | ||| || || || ||||| ||
Sbjct 5359474 TTTTGAGGTGAAGGAAGGCGATCGTGTTGCGCAGTTAAT 5359436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462301081706000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |