Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq23 132 5e-26 >seq23 Length=743066 Score = 132 bits (146), Expect = 5e-26 Identities = 339/511 (66%), Gaps = 4/511 (1%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||||| ||| | || ||||| ||||| || ||||| | | || ||||||| Sbjct 463102 TTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCT 463161 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||||| || || || || | || | | | ||| || ||||| || || | Sbjct 463162 CCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAGGAGGA 463221 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | ||| || || || || || ||||| ||| | | |||||||||| | ||| Sbjct 463222 GACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA- 463280 Query 16854 GTAC-CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | || |||||||| || ||||||||| |||||| || | || ||||| | || | | Sbjct 463281 GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGACA 463340 Query 16913 -CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 || | ||| || || ||| || ||| || ||||| || | || ||||| || Sbjct 463341 TCTTG-AACGGATTGCTTGGATGGGCGATGCTTGAGATGGGAGAAGAGGAGGCATGCAAA 463399 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 || || | || ||||| | | ||| |||||||| || || || | || | ||| Sbjct 463400 GTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCAT 463459 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 || || ||||| | ||| || || | |||||| || || || ||||| ||||| || Sbjct 463460 GAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTTC 463519 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 |||| || || |||| | |||| || | || | | |||| |||||||||| Sbjct 463520 AACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCATTT 463579 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182 |||| ||||| || | ||| |||||| Sbjct 463580 GACAGCCCAGTCGGCCTTCTTCTTGATGCAA 463610 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| || ||| |||| ||||| ||||||||||| || || Sbjct 463713 ATATATGTGTCGATGAGAAGCGAGTATGTTTCAGAGTGAATGTTCTCCATCATGATTTGG 463772 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 |||||||| ||||||| ||||| | ||||||||||| | |||||| || | | Sbjct 463773 AATCCGTAGAAGCATCTTGCTTCTGGGATTTGAACTTCACCACTGAATCGCTCAACCAAG 463832 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| || || || |||||| || ||||| || || Sbjct 463833 TTTTCATTGACAATTCCGTCGGATGCAGCGAAGAATGC 463870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517540126955280