Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq29 271 9e-68 seq23 109 7e-19 >seq29 Length=608615 Score = 271 bits (300), Expect = 9e-68 Identities = 1317/2066 (64%), Gaps = 49/2066 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 || |||||||| || || || || | | ||||| | |||||||||||| || || | | Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | |||| || |||||||||| ||| | ||| | |||||| || Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCTTTCATG 544492 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || || |||||||||||| |||||| ||||| || || | || |||||||||| | Sbjct 544493 TGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACA 544552 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || || || | |||||||||| ||| || |||| ||| || || |||||| | Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 || | |||| || || ||||||||||| | || || | ||||| || | |||| | Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGAC 544672 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | | ||| | | || | || || || || || || || ||||||||| Sbjct 544673 CAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGGGTTGACGACCTGGAATTCTCCA 544732 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | | || | || | ||| || || ||||| ||||| | | | || || || Sbjct 544733 GCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCA 544792 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | ||||| | || ||||| |||||||| || || | | | || | | ||| Sbjct 544793 AGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCG 544852 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 53344 | | |||| | || | | ||||||| ||| | ||| | ||| ||| Sbjct 544853 TGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCC 544912 Query 53345 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 53404 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 544913 CACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAAGTTTCGTATGGA 544972 Query 53405 CC---TTCCTTCTCAGCTAGTTCACAAC---TCGCCTCTAATGCACCGTAATAAATGGTT 53458 || |||||| | | || |||| | || || ||| ||| || || || Sbjct 544973 CCAAGTTCCTTTGC-----GATCTCAACGGATGAGGTC-AAGGCAGCGTGGTAGATAGTC 545026 Query 53459 TCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG 53517 || || || | | || || | |||| ||||| | || |||||| | | | Sbjct 545027 TCAAAAATTTGGATGTTGAGGTGCTTG-GCTTCGGGAGAGTCGAATGGAAGACGAAGGGC 545085 Query 53518 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 53577 | ||| || || || | ||||||||||| | | ||||||||| || | ||| | Sbjct 545086 CAAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GC 545144 Query 53578 GATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGA 53636 |||| ||||| ||| |||||||| || || || ||||| || || | ||||| | Sbjct 545145 TCTTTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAA 545204 Query 53637 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATTGTCCA---TC-TATTA- 53690 ||| |||| | || || | || || | ||||| || || || || | ||| Sbjct 545205 CAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAA 545264 Query 53691 CAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 53750 |||| | ||| || ||||| |||| |||||| || ||||||| | | | | Sbjct 545265 CAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGT 545324 Query 53751 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTAC 53810 | | | ||||| ||||| | || | || ||||||| || | ||| |||| Sbjct 545325 ACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTAC 545384 Query 53811 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATT 53870 |||| ||||| || ||||| || ||||| ||||| || | || || || | || | | Sbjct 545385 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCT 545444 Query 53871 CTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CT 53928 | | ||| | | ||| | ||||||| || | ||| | ||| | || Sbjct 545445 CGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTC---TTGCGACCCTTGCCAGCCT 545501 Query 53929 T-TCGTATAGTGT-ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 53986 | ||||| | | | ||| | |||||||| || || |||| | |||| || ||| Sbjct 545502 TCTCGTA-ACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGA 545560 Query 53987 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 54046 ||||||| || ||||| | | ||| ||||||| | | || || ||||| |||||| Sbjct 545561 CATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGA 545620 Query 54047 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105 ||||||||||| | || ||| || ||||| | | | | ||| || || || ||| Sbjct 545621 TCAGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGATT 545679 Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165 ||| ||||| |||||| | | || ||| | |||||| || || | ||| | | | Sbjct 545680 CTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAA 545739 Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225 | | ||||| || ||||| || || || || | ||||| |||||||| || |||||| Sbjct 545740 AGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCG 545799 Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285 | ||| |||| ||| || ||||| || ||||| |||| ||||||| ||| | || Sbjct 545800 GAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGC 545859 Query 54286 ACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCG 54345 ||| || | ||| ||||| || || || || | || ||||| | || || Sbjct 545860 ACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAAT 545919 Query 54346 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405 || || || || || || || || |||||||| || |||||| | || || || Sbjct 545920 CTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGA 545979 Query 54406 AGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 54464 ||| | || ||| | | || |||||| || | || || || || || ||||| Sbjct 545980 AGAAAGTT-GTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGT 546038 Query 54465 ATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATGAATT 54523 | || | || | || |||||| ||||| || || || ||||| || | ||||| Sbjct 546039 ACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAATA 546097 Query 54524 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 54583 || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 546098 CCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACGT 546157 Query 54584 AGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 54641 || | ||| ||| || | ||| || ||||| || || | ||| ||||| ||||| | Sbjct 546158 AGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTCGAT 546215 Query 54642 CGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC--ATGGTAAT 54699 |||| | ||| | |||||||||| || | || | | |||| |||| | ||| | | Sbjct 546216 CGTAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCAAATGTT--T 546272 Query 54700 ACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCT 54758 ||| ||| || ||||| || | |||||| | || || ||| | | ||||||| Sbjct 546273 CTTTGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATATTGATATAAATCGC 546332 Query 54759 TCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAG 54818 || || | | ||| |||| || |||| ||||| || || || || || || | | Sbjct 546333 GGATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACGGG 546392 Query 54819 CGGCTAGAATGGCATAATCCGGATGT 54844 | |||||||| |||||||| |||||| Sbjct 546393 CAGCTAGAATAGCATAATCGGGATGT 546418 >seq23 Length=743066 Score = 109 bits (120), Expect = 7e-19 Identities = 562/903 (62%), Gaps = 65/903 (7%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| || || || | || ||||| || || || || || | || || ||||| Sbjct 463101 TTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTC 463160 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 |||||||| ||| |||| |||| | | |||| | | | |||| | | Sbjct 463161 TCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAGGAGG 463220 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 | | ||| || || ||||| || ||| ||||| | | |||||||| | || Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280 Query 24024 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 24083 | |||||||||| | || | ||||||||| || || || || || || || | | Sbjct 463281 GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGACA 463340 Query 24084 GATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140 |||| || | || ||| | || | || | | ||| || | | ||||| Sbjct 463341 --TCTTGAACGGATTGCTTGGATGGGCG-ATGCTTGAGATGGGAGAAGAGGAGGCATGCA 463397 Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200 || || ||| || || ||||| | || | ||||||||| || |||||||| | | Sbjct 463398 AAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCC 463457 Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260 || || |||||||| |||||||| || ||||| || || ||||| || |||||||| ||| Sbjct 463458 ATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCT 463517 Query 24261 TCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT---GTCATGTATCCAC 24317 || || || || || || | || | || || || | | ||| || ||||| Sbjct 463518 TCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCAT 463577 Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC------------------ 24359 || |||||| ||||||||||| || | ||||| | | || Sbjct 463578 TTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGTTGTTAGATTGTAC 463637 Query 24360 ---------------------------------TCTATAGCATTAAAGAGATA-Gttttt 24385 || ||||| || || ||||| || ||| Sbjct 463638 ATCGCAGATGGGTGGGTTTATAACTTACTGGTATCGATAGCGTTGAATAGATATGTCTTT 463697 Query 24386 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 24445 | | | || || | |||||| || || | ||| || |||| || |||||||| Sbjct 463698 TGTGCTTGT-TCCTTGATATATGTGTCGATGAGAAGCGAGTATGTTTCAGAGTGAATGTT 463756 Query 24446 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACA 24505 || || ||||| ||||||||||| ||||| || || | || || ||||| || Sbjct 463757 CTCCATCATGATTTGGAATCCGTAGAAGCATCTTGCTTCTGGGATTTGAACTTCACCACT 463816 Query 24506 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 24565 ||||| || | || |||||||| || |||||||| || || || || || | || Sbjct 463817 GAATCGCTCAACCAAGTTTTCATTGACAATTCCGTCGGATGCAGCGAAGAATGCGAGAAC 463876 Query 24566 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTT 24622 || ||||| || ||||| | ||| || ||||| || | | ||| || Sbjct 463877 GTGGGAGATAAAGTAGCGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGTAGATCCTT 463936 Query 24623 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 24682 || | ||| | ||||| | ||||| || ||||| |||||||| || ||||| | ||| Sbjct 463937 TGACAGATCAATCTCTTCTGCGGTCCAGAAAGATGCTTCTGCCTTCTTGTACATCTGCCA 463996 Query 24683 GAT 24685 ||| Sbjct 463997 GAT 463999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593715321394080