Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq23 118 1e-21
seq27 109 6e-19
seq54 93.3 4e-14
seq11 82.4 8e-11
>seq23
Length=743066
Score = 118 bits (130), Expect = 1e-21
Identities = 197/284 (69%), Gaps = 3/284 (1%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| || || || |||||||||| || ||| | || |||
Sbjct 463999 ATCTGGCAGATGTACAAGAAGGCAGAAGCATCTTTCTGGACCGCAGAAGAGATTGATCTG 463940
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752
|| ||||| ||||||| | | | || || |||||||| | || |||
Sbjct 463939 TCAAAGGATCTACACGACTGGAACAACAGACTCAATGATGACGAGCGCTACTTTATCTCC 463880
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || || || ||||| || |||||| || ||||| || || |||| |||||
Sbjct 463879 CACGTTCTCGCATTCTTCGCTGCATCCGACGGAATTGTCAATGAAAACTTGGTTGAGCGA 463820
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | || || || | | || || | ||||||||||| || || ||| |||
Sbjct 463819 TTCAGTGGTGAAGTTCAAATCCCAGAAGCAAGATGCTTCTACGGATTCCAAATCATGATG 463760
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916
|||||| | ||||| |||| || ||| ||||||||||| ||
Sbjct 463759 GAGAACATTCACTCTGAAACATACTCGCTTCTCATCGACACATA 463716
>seq27
Length=671268
Score = 109 bits (120), Expect = 6e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || |||||||||||||||||| |||| || || | |
Sbjct 264027 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 263968
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || || | ||||| ||||| ||||| | |||||
Sbjct 263967 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 263908
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||| | |||| ||| || || || || || || | || || || ||||||||||
Sbjct 263907 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 263848
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||| || ||| |||| || || | ||||| ||
Sbjct 263847 ATCCAAAAAGAGTCCACCCTTCACTTGGTGTTACG 263813
>seq54
Length=188590
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||| |||| ||||| || || || |||||||| ||||||||| | || ||||| ||
Sbjct 62633 AATGATAATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCC 62574
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | ||||| || || | ||||| ||||| || || | |||
Sbjct 62573 TCTGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGAC 62514
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| ||||| | |||| ||| || || || || || |||| || || ||| ||||||
Sbjct 62513 CAACAACGCTTGATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGACTAC 62454
Query 40867 AACATCCAGAAGG 40879
|||||||| ||||
Sbjct 62453 AACATCCAAAAGG 62441
>seq11
Length=1281110
Score = 82.4 bits (90), Expect = 8e-11
Identities = 129/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| ||||||||| | || ||||| | | ||| | | | | | |||
Sbjct 150797 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGAGCGATACAATTGATAATGTTAAGTCT 150856
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| || | ||||| ||||| |||||| | ||||| || || | || | ||| || |||
Sbjct 150857 AAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAA 150916
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
|| || || || | |||||| | | ||||||||||| || |||||| |||| || |||
Sbjct 150917 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCCACTCTCCAT 150976
Query 40894 CTAGT 40898
|| ||
Sbjct 150977 CTCGT 150981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515213751556960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |