Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq27 132 4e-26 seq11 116 3e-21 >seq27 Length=671268 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 118527 AACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCC 118586 ||||||||||| | || ||||||||||| |||||||| ||| | ||| || |||| Sbjct 263816 AACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 263875 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || || ||||||||| |||| | ||||| || ||||| || || ||||||||||| Sbjct 263876 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 263935 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 || || || || | |||| |||||||| ||| ||||||| ||| | ||| Sbjct 263936 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 263995 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||| || || || || || || ||||||||| || Sbjct 263996 TTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 264031 >seq11 Length=1281110 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | ||| | |||||||||| ||||| || || ||||| ||||||||| Sbjct 151284 TACCACCGCGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGG 151225 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| |||||| || || ||||| ||| |||| | ||| || |||||||| | Sbjct 151224 AGAGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGG 151165 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| ||| || ||||| | |||| ||||| | || | Sbjct 151164 GAATTCCCTCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAA 151105 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 |||||| || | || || ||||| || || || |||| Sbjct 151104 CCTCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAACAA 151066 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||||| || ||||| ||||||||||| | ||||| ||| || Sbjct 151492 ACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCA 151433 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| |||||| |||| ||||| || || ||||| || || |||||||||||| | Sbjct 151432 AGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGA 151373 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||| |||| ||| ||||| | || | || || Sbjct 151372 ATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTCTTT 151313 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | ||| || || ||||||||||| Sbjct 151312 CCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| |||||||||||||| || |||| ||||| |||||| || ||| Sbjct 150975 TGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAAGTTGT 150916 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| ||| | || | |||||| || ||||| || || ||||||||||| Sbjct 150915 TTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTC 150866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433825926937432