Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq27 132 4e-26
seq11 116 3e-21
>seq27
Length=671268
Score = 132 bits (146), Expect = 4e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 118527 AACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCC 118586
||||||||||| | || ||||||||||| |||||||| ||| | ||| || ||||
Sbjct 263816 AACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 263875
Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646
|| || || ||||||||| |||| | ||||| || ||||| || || |||||||||||
Sbjct 263876 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 263935
Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706
|| || || || | |||| |||||||| ||| ||||||| ||| | |||
Sbjct 263936 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 263995
Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||||| || || || || || || ||||||||| ||
Sbjct 263996 TTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 264031
>seq11
Length=1281110
Score = 116 bits (128), Expect = 3e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | ||| | |||||||||| ||||| || || ||||| |||||||||
Sbjct 151284 TACCACCGCGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGG 151225
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||||| |||||| || || ||||| ||| |||| | ||| || |||||||| |
Sbjct 151224 AGAGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGG 151165
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || |||||||||||| ||| || ||||| | |||| ||||| | || |
Sbjct 151164 GAATTCCCTCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAA 151105
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
|||||| || | || || ||||| || || || ||||
Sbjct 151104 CCTCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAACAA 151066
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | ||||| || ||||| ||||||||||| | ||||| ||| ||
Sbjct 151492 ACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCA 151433
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| ||||| |||||| |||| ||||| || || ||||| || || |||||||||||| |
Sbjct 151432 AGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGA 151373
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| |||| ||| ||||| | || | || ||
Sbjct 151372 ATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTCTTT 151313
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | ||| || || |||||||||||
Sbjct 151312 CCGGTTAAAGTCTTGACGAAAATCTGCAT 151284
Score = 95.1 bits (104), Expect = 1e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| |||||||||||||| || |||| ||||| |||||| || |||
Sbjct 150975 TGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAAGTTGT 150916
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||| ||| | || | |||||| || ||||| || || |||||||||||
Sbjct 150915 TTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTC 150866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433825926937432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |