Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq27 114 1e-20
seq11 91.5 2e-13
>seq27
Length=671268
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| |||||||| || | ||| ||| ||||| || ||||| || | ||||| || |
Sbjct 263812 ACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCC 263871
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || || ||||| |||||||| || | |||||| ||||||| || | | ||||||
Sbjct 263872 ATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 263931
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| || |||| | | | ||||| || || || |||| |||||
Sbjct 263932 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 263991
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||||||||| || ||||| || ||||| |||||
Sbjct 263992 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq11
Length=1281110
Score = 91.5 bits (100), Expect = 2e-13
Identities = 162/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010
||||| || || | | ||| | |||||| ||||| ||||| ||||||||||| |||||
Sbjct 151744 TATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAG 151685
Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070
|| | || || | | || || | |||||| || || || || | || ||| |||||
Sbjct 151684 TCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCA 151625
Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA 43129
| || | | |||||| ||| ||| | |||| |||| | | | || || |||
Sbjct 151624 GGGGGGATACCCTCCTTATCC-TGAATCTTTGACTTGACATTATCAATAGTATCTGACGA 151566
Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || | || || || || || || | ||||| ||||||||||||||
Sbjct 151565 TTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571811553028880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |