Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq11 95.1 8e-15
seq27 93.3 3e-14
>seq11
Length=1281110
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| || || ||||| || || |||||||||||||| || | | ||
Sbjct 151723 AGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCGGAAAGTGTTCTACCATCC 151664
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
||||||||||| ||||| || || | | ||| ||||| ||| | | |||||| ||
Sbjct 151663 TCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCC 151604
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||| | || | || | ||| | |||||| || || | || || ||
Sbjct 151603 TGAATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTC 151544
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || | ||| || |||||||| |||||
Sbjct 151543 TTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512
>seq27
Length=671268
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
||||| || |||||||||||||| || |||| | || || | ||||| || |||||
Sbjct 263837 TCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAG 263896
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| | ||||| |||||| || | | ||||||||| ||||| ||| | || |
Sbjct 263897 ATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 263956
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | || || || || | |||||||||||||| || || || || ||
Sbjct 263957 TCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACG 264016
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 264017 AAGATCTGCAT 264027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323068668925760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |