Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq27 120 2e-22 seq11 107 2e-18 >seq27 Length=671268 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183 ||| |||||||| || ||| ||| || || |||||||||||| || || | || Sbjct 263815 TAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATC 263874 Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || ||||| ||||| ||||| ||||| |||||||||||||| || | ||||||||||| Sbjct 263875 CTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTC 263934 Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 | || || ||| || | | | ||||| | ||| ||||| | ||| || || Sbjct 263935 CTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 263994 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| || ||||| || ||||| |||||| Sbjct 263995 TTTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 264028 >seq11 Length=1281110 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| ||||| ||||| ||||||||||||||| ||| | | | || ||| Sbjct 151720 ACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCGGAAAGTGTTCTACCATCCTCC 151661 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || ||||| || || ||||| | ||||||||| || || | ||||||||| ||| | Sbjct 151660 AACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCCTGA 151601 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | || || || || | ||||| ||||| Sbjct 151600 ATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTCTTC 151541 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||| |||||||||||||| Sbjct 151540 CCAGTCAAAGTCTTAACAAAGATTTGCAT 151512 Score = 105 bits (116), Expect = 5e-18 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| |||||| |||||||||||||| ||| |||| | || || |||||| Sbjct 150975 TGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAAGTTGT 150916 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||||||||| ||||| |||||||||||||| || | |||||||||||| Sbjct 150915 TTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 150865 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | | ||| | |||||||| || || ||||||||||| ||||| ||| Sbjct 151282 CCACCGCGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAG 151223 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || |||| | || || ||||| ||||||||||| ||||| || ||||| ||||| || Sbjct 151222 AGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGA 151163 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAAC 45261 | ||||||||||| ||| || |||||| Sbjct 151162 ATTCCCTCCTTGTCTTGAATCTTCGACTTAAC 151131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395071126527766