Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq23 141 8e-29 >seq23 Length=743066 Score = 141 bits (156), Expect = 8e-29 Identities = 233/333 (70%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| |||||||||||||| || ||||||| ||||| | || ||| Sbjct 463999 ATCTGGCAGATGTACAAGAAGGCAGAAGCATCTTTCTGGACCGCAGAAGAGATTGATCTG 463940 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | ||||| || ||| | | ||||| Sbjct 463939 TCAAAGGATCTACACGACTGGAACAACAGACTCAATGATGACGAGCGCTACTTTATCTCC 463880 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||| |||||||| || ||||| || || || ||||| || || Sbjct 463879 CACGTTCTCGCATTCTTCGCTGCATCCGACGGAATTGTCAATGAAAACTTGGTTGAGCGA 463820 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || ||||| ||| | | || || |||||||| |||||||| ||| | || Sbjct 463819 TTCAGTGGTGAAGTTCAAATCCCAGAAGCAAGATGCTTCTACGGATTCCAAATCATGATG 463760 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGG-ACAACGA 57865 || ||| | || || |||| || ||||| |||||||| || || | |||| |||| | Sbjct 463759 GAGAACATTCACTCTGAAACATACTCGCTTCTCATCGACACATATATCAAGGAACAAGCA 463700 Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAAC 57898 | | | || || || |||||||| ||||| || Sbjct 463699 CAAAAGACATA-TCTATTCAACGCTATCGATAC 463668 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| || ||| | |||||||||| || | | | || || || | | Sbjct 463600 AAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAATTCTACTTTTGCTCAACGT 463541 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || |||| ||||||||||| |||||||| ||||| || || ||| || | || || Sbjct 463540 CTCGTCGCTTTCGCCGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCCTCCATCTTC 463481 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| || || || ||| | || || || || |||||| | || || || Sbjct 463480 TGGCTTAAGAAGCGTGGTCTCATGGCTGGACTCACTTTCTCCAACGAACTCATCTCCCGT 463421 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 ||||| || ||||| ||||| ||||| ||||| Sbjct 463420 GACGAAGGCCTCCACACTGACTTTGCATGCCT 463389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761686020320