Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq23 107 4e-18 seq29 91.5 3e-13 >seq23 Length=743066 Score = 107 bits (118), Expect = 4e-18 Identities = 349/539 (65%), Gaps = 6/539 (1%) Strand=Plus/Minus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAA--CGA-TTTGGC 101907 |||||||||||||| | |||||| | || ||||| ||| ||| || | | ||| || Sbjct 463607 CATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAATTCTACTTTTGC 463548 Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 ||| | || || || || || |||||||| || ||||| || | ||||| || Sbjct 463547 TCAACGTCTCGTCGCTTTCGCCGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCCTC 463488 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 ||| |||||| | ||||| | ||| | || |||| ||||| | |||||| || |||| Sbjct 463487 CATCTTCTGGCTTAAGAAGCGTGGTCTCATGGCTGGACTCACTTTCTCCAACGAACTCAT 463428 Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087 || | |||||||| || || |||||||||||| | || || | | | Sbjct 463427 CTCCCGTGACGAAGGCCTCCACACTGACTTTGCATGCCTCCTCTTCTCCCA---TCTCAA 463371 Query 102088 TGATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACA 102147 || |||||| | || ||| || | |||| ||||| || ||| || || Sbjct 463370 GCATCGCCCATCCAAGCAATCCGTTCAAGATGTCATCACCGAAGCTGTAGAAATCGAGCA 463311 Query 102148 AGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAG 102207 ||||||| | || | | || || | | |||||||||||| || | |||| Sbjct 463310 AGAATTTTTGACCGAGGCTCTTCCATGTGCTCTCTTGGGAATGAACTCCACTCTCATGAA 463251 Query 102208 CCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTA 102267 || ||||| || || || || ||| || | | | |||| || || ||| Sbjct 463250 GCAATACATCGAGTTCGTTGCTGATCGTCTCCTCCTCGCTCTGGGTAACGACAAAGTCTA 463191 Query 102268 TAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTT 102327 | | ||||||| ||| |||||||| ||||| ||| | | ||||||||||| Sbjct 463190 CAGATCTGCCAACCCATTCGACTTCATGGAGAATATCTCCTTGGCTGGCAAGACCAACTT 463131 Query 102328 TTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGA 102386 || || |||||||| | ||| || ||| || ||||||||| || | | |||| Sbjct 463130 CTTCGAGAAGAGAGTTGGCGATTACCAAAAGGCTGGTGTCATGGCTGGTACCCAAAAGA 463072 >seq29 Length=608615 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || || | || || ||| |||| ||||| || || ||| | ||| Sbjct 545870 TGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTG 545929 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG- 94892 || |||||||| || || ||||| |||| | | | | ||||||||||| |||||||| Sbjct 545930 TCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTGT 545989 Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 | |||| || || | || ||||| ||||| ||||| ||||| || | | || Sbjct 545990 GCCTGTG-GGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGTACTTGTTTGA 546048 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 ||| | || ||||| |||||| || | || || |||||||| || || || || Sbjct 546049 CATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCGTGAATACCAACCGCAAC 546108 Query 95013 ACGCATAATCAT 95024 |||||| ||||| Sbjct 546109 ACGCATGATCAT 546120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989573273527930