Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq23 107 4e-18
seq29 91.5 3e-13
>seq23
Length=743066
Score = 107 bits (118), Expect = 4e-18
Identities = 349/539 (65%), Gaps = 6/539 (1%)
Strand=Plus/Minus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAA--CGA-TTTGGC 101907
|||||||||||||| | |||||| | || ||||| ||| ||| || | | ||| ||
Sbjct 463607 CATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAATTCTACTTTTGC 463548
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||| | || || || || || |||||||| || ||||| || | ||||| ||
Sbjct 463547 TCAACGTCTCGTCGCTTTCGCCGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCCTC 463488
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
||| |||||| | ||||| | ||| | || |||| ||||| | |||||| || ||||
Sbjct 463487 CATCTTCTGGCTTAAGAAGCGTGGTCTCATGGCTGGACTCACTTTCTCCAACGAACTCAT 463428
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
|| | |||||||| || || |||||||||||| | || || | | |
Sbjct 463427 CTCCCGTGACGAAGGCCTCCACACTGACTTTGCATGCCTCCTCTTCTCCCA---TCTCAA 463371
Query 102088 TGATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACA 102147
|| |||||| | || ||| || | |||| ||||| || ||| || ||
Sbjct 463370 GCATCGCCCATCCAAGCAATCCGTTCAAGATGTCATCACCGAAGCTGTAGAAATCGAGCA 463311
Query 102148 AGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAG 102207
||||||| | || | | || || | | |||||||||||| || | ||||
Sbjct 463310 AGAATTTTTGACCGAGGCTCTTCCATGTGCTCTCTTGGGAATGAACTCCACTCTCATGAA 463251
Query 102208 CCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTA 102267
|| ||||| || || || || ||| || | | | |||| || || |||
Sbjct 463250 GCAATACATCGAGTTCGTTGCTGATCGTCTCCTCCTCGCTCTGGGTAACGACAAAGTCTA 463191
Query 102268 TAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTT 102327
| | ||||||| ||| |||||||| ||||| ||| | | |||||||||||
Sbjct 463190 CAGATCTGCCAACCCATTCGACTTCATGGAGAATATCTCCTTGGCTGGCAAGACCAACTT 463131
Query 102328 TTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGA 102386
|| || |||||||| | ||| || ||| || ||||||||| || | | ||||
Sbjct 463130 CTTCGAGAAGAGAGTTGGCGATTACCAAAAGGCTGGTGTCATGGCTGGTACCCAAAAGA 463072
>seq29
Length=608615
Score = 91.5 bits (100), Expect = 3e-13
Identities = 173/252 (69%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| || || || | || || ||| |||| ||||| || || ||| | |||
Sbjct 545870 TGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTG 545929
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG- 94892
|| |||||||| || || ||||| |||| | | | | ||||||||||| ||||||||
Sbjct 545930 TCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTGT 545989
Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952
| |||| || || | || ||||| ||||| ||||| ||||| || | | ||
Sbjct 545990 GCCTGTG-GGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGTACTTGTTTGA 546048
Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012
||| | || ||||| |||||| || | || || |||||||| || || || ||
Sbjct 546049 CATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCGTGAATACCAACCGCAAC 546108
Query 95013 ACGCATAATCAT 95024
|||||| |||||
Sbjct 546109 ACGCATGATCAT 546120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989573273527930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |