Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq29 304 2e-77 seq23 111 2e-19 >seq29 Length=608615 Score = 304 bits (336), Expect = 2e-77 Identities = 1326/2067 (64%), Gaps = 51/2067 (2%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 || |||||||| || || || || | | ||||| | |||||||||||| || || | | Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | |||| || |||||||||| || | ||| | |||||| || Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCTTTCATG 544492 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || || |||||||||||| |||||| ||||| || || | || |||||||||| | Sbjct 544493 TGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACA 544552 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || || || | |||||||||| ||| || |||| ||| || || |||||| | Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 || | |||| || |||||||||||||| | || || | ||||| || | |||| | Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGAC 544672 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | | ||| | | || | || || ||||| || || |||||||||||| Sbjct 544673 CAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGGGTTGACGACCTGGAATTCTCCA 544732 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | | || | || | ||| || || ||||| ||||| | | || || || Sbjct 544733 GCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCA 544792 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 | ||||| | || ||||| |||||||| || || | | | || | | ||| Sbjct 544793 AGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCG 544852 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNN 62582 | | |||| | || | ||||||| ||| | ||| | ||| |||| Sbjct 544853 TGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCC 544912 Query 62583 NNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGT 62642 ||||| || ||| ||| | | || ||| ||| || || ||||| Sbjct 544913 CACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAAGTTTCGTATGGA 544972 Query 62643 CC---TTCCTTCTCAGCTAGTTTACAAC---TCGCCTCTAATGCACCGTAATAAATGGTT 62696 || |||||| | | | |||| | || || ||| ||| || || || Sbjct 544973 CCAAGTTCCTTTGC-----GATCTCAACGGATGAGGTC-AAGGCAGCGTGGTAGATAGTC 545026 Query 62697 TCAAAGATCTTCTTATTTAGAT-CTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG 62755 ||||| || | | || || | |||| ||||| || || |||||| | | | Sbjct 545027 TCAAAAATTTGGATGTTGAGGTGCTTG-GCTTCGGGAGAGTCGAATGGAAGACGAAGGGC 545085 Query 62756 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62815 | ||| || || || | ||||||||||| | | ||||||||| || | ||| | Sbjct 545086 CAAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GC 545144 Query 62816 GATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62874 |||| ||||| ||| |||||||| || || || ||||| || || | |||||| | Sbjct 545145 TCTTTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAA 545204 Query 62875 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCA---TC-TATTA- 62928 ||| |||| | || || | || || | ||||| || |||| || | ||| Sbjct 545205 CAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAA 545264 Query 62929 CAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCAT 62988 |||| | ||| || | ||| |||| ||||| || ||||||| | | | | Sbjct 545265 CAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGT 545324 Query 62989 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTAC 63048 | | | ||||| ||||| | || | |||||||||| || | ||| |||| Sbjct 545325 ACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTAC 545384 Query 63049 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 63108 |||| ||||| || ||||| || ||||| ||||| ||| | || || || | || | | Sbjct 545385 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCT 545444 Query 63109 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT---C 63165 | | ||| | | ||| | | ||||||| || | ||| | |||| | | Sbjct 545445 CGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTC---TTGCGAC-CCTTGCCAGCC 545500 Query 63166 TT-TCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGA 63224 || ||||| ||| | || ||||| || || |||| | |||| | ||| Sbjct 545501 TTCTCGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGA 545560 Query 63225 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63284 ||||||| || ||||| | | ||| ||||||| | | || || ||||| |||||| Sbjct 545561 CATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGA 545620 Query 63285 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343 ||||||||||| | || ||| || ||||| | || | | ||| || || || ||| Sbjct 545621 TCAGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGATT 545679 Query 63344 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63403 ||| ||||| |||||| | | || ||| | |||||| || || | ||| | || | Sbjct 545680 CTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAA 545739 Query 63404 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63463 | | ||||| || ||||| || || || || | ||||| |||||||| || |||||| Sbjct 545740 AGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCG 545799 Query 63464 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGC 63523 | ||| |||| ||| ||||| || | || |||||||||| ||||||| | ||| | || Sbjct 545800 GAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGC 545859 Query 63524 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63583 ||| || | ||| ||||| || || || || | || ||||| | || || Sbjct 545860 ACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAAT 545919 Query 63584 TTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643 || || ||||| || || || || || ||||| || |||||| | || || || Sbjct 545920 CTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGA 545979 Query 63644 AGACATTTGGTGAC-GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63702 ||| | || ||| | | | || |||||| || | || || || || || ||||| Sbjct 545980 AGAAAGTT-GTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGT 546038 Query 63703 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATT 63761 | || | || | || |||||| |||||||| || || ||||| || | ||||| Sbjct 546039 ACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAATA 546097 Query 63762 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTC 63821 || || || |||||||| | ||| || || || | ||| ||| |||| | | Sbjct 546098 CCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACGT 546157 Query 63822 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 63879 | | ||| ||| || | ||| || ||||| || || | ||| ||||| ||||| | Sbjct 546158 AGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTCGAT 546215 Query 63880 CGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCC--ATGGTAAT 63937 |||| | ||| | || ||||| | || | || | | |||| | || | ||| | | Sbjct 546216 CGTAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCAAATGTT--T 546272 Query 63938 ACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA-ATAAATCC 63995 ||| ||| || ||||| || | |||||| | || || ||| |||| ||||||| Sbjct 546273 CTTTGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATA-TTGATATAAATCG 546331 Query 63996 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTG 64055 || || | | ||| |||| || |||| |||||| || || || | || || | | Sbjct 546332 CGGATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACGG 546391 Query 64056 GCGGCTAGAATGGCATAATCCGGATGT 64082 || |||||||| |||||||| |||||| Sbjct 546392 GCAGCTAGAATAGCATAATCGGGATGT 546418 >seq23 Length=743066 Score = 111 bits (122), Expect = 2e-19 Identities = 561/901 (62%), Gaps = 61/901 (7%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| || || || | || ||||| || || || || || |||| || ||||| Sbjct 463101 TTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTC 463160 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 |||||||| || || || |||| | |||| | ||| | |||| | | Sbjct 463161 TCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAGGAGG 463220 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | | ||| || ||||| || || ||| ||||| | | |||||||| | ||| Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 | |||||||||| | || | ||||||||| || || ||| || | || || | | Sbjct 463281 GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGACA 463340 Query 33531 AATCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 | ||||| || ||| | || | ||| | ||| || | | ||||| || Sbjct 463341 TCTTGAACGGATTGCTTGGATGGGCG-ATGCTTGAGATGGGAGAAGAGGAGGCATGCAAA 463399 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 || ||| || || ||||| | || | |||||| || || |||||||| | ||| Sbjct 463400 GTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCAT 463459 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 || |||||||| |||||||| || ||||| ||||| |||||||| ||||| || ||||| Sbjct 463460 GAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTTC 463519 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGTATCCACTT 33766 || || || || || | || | | || || | | ||| || ||||| || Sbjct 463520 AACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCATTT 463579 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG------------------------CAT 33802 |||||| ||||||||||| || | ||||| ||| Sbjct 463580 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGTTGTTAGATTGTACAT 463639 Query 33803 CG---------------------------TTTCTATGGCATTAAAGAGATA-Gttttttt 33834 || | || || || || || ||||| || |||| Sbjct 463640 CGCAGATGGGTGGGTTTATAACTTACTGGTATCGATAGCGTTGAATAGATATGTCTTTTG 463699 Query 33835 CATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTT 33894 | | || || | ||| || ||||| | ||| || |||| || |||||||| | Sbjct 463700 TGCTTGT-TCCTTGATATATGTGTCGATGAGAAGCGAGTATGTTTCAGAGTGAATGTTCT 463758 Query 33895 CAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAA 33954 | || || || ||||||||||| ||||| || || | || || ||||| || | Sbjct 463759 CCATCATGATTTGGAATCCGTAGAAGCATCTTGCTTCTGGGATTTGAACTTCACCACTGA 463818 Query 33955 ATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACAT 34014 |||| || | || |||||||| || ||||| || || || || || || | || | Sbjct 463819 ATCGCTCAACCAAGTTTTCATTGACAATTCCGTCGGATGCAGCGAAGAATGCGAGAACGT 463878 Query 34015 GTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTTAG 34071 | ||||| || ||||| | ||| || ||||| || | | ||| || | Sbjct 463879 GGGAGATAAAGTAGCGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGTAGATCCTTTG 463938 Query 34072 ATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGA 34131 | | ||| | ||||| | ||||| || ||||| |||||||| || ||||| | ||||| Sbjct 463939 ACAGATCAATCTCTTCTGCGGTCCAGAAAGATGCTTCTGCCTTCTTGTACATCTGCCAGA 463998 Query 34132 T 34132 | Sbjct 463999 T 463999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629810939678880