Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq29 104 2e-17 >seq29 Length=608615 Score = 104 bits (114), Expect = 2e-17 Identities = 374/585 (64%), Gaps = 0/585 (0%) Strand=Plus/Plus Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025 || || |||||||| || ||||| || | ||| ||| | | ||||| || || | | Sbjct 545552 AAACCCGGACATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTC 545611 Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTC 38085 || || | |||||| | ||| || ||| || | ||| | | | |||||| || Sbjct 545612 ATGAAGAGATCAGGAATCCACAAGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTA 545671 Query 38086 CCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAA 38145 || |||||| | || || || ||||| | ||| || |||||||| || | ||| Sbjct 545672 CCATGATTCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAA 545731 Query 38146 ATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTA 38205 | | | || || || | || | ||| || || | || |||||| | ||||| || Sbjct 545732 ACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTG 545791 Query 38206 TATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTA 38265 | | || | ||| || || || || || || || ||||| |||||| ||||| | | Sbjct 545792 AAAACTCGGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCA 545851 Query 38266 CCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAA 38325 || |||| || || | || | || || ||||| |||| ||||| || | Sbjct 545852 CCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATG 545911 Query 38326 GCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATA 38385 || || || || || || | ||||| || ||||| || || || || | | Sbjct 545912 GCACAAATCTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGG 545971 Query 38386 AAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGT 38445 || || ||| | ||| | | ||| || || || || | ||| || || |||||| Sbjct 545972 AAGCACGAAGAAAGTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGT 546031 Query 38446 ATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCG 38505 | || | || | |||| |||| ||||| || || || || |||||| | ||| Sbjct 546032 GTAAAGTACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG 546091 Query 38506 TGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCT 38550 |||||||| | | || | ||| | ||| |||||||| | |||| Sbjct 546092 TGAATACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCT 546136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468519845350240