Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq29 311 1e-79
seq23 123 4e-23
>seq29
Length=608615
Score = 311 bits (344), Expect = 1e-79
Identities = 1330/2067 (64%), Gaps = 51/2067 (2%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
|| |||||||| || || || || | | ||||| | |||||||||||| || || | |
Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
|| | |||| || ||||||||| || | ||| | |||||| ||
Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCTTTCATG 544492
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
|| || |||||||||||| |||||| ||||| || || | || |||||||||| |
Sbjct 544493 TGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACA 544552
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957
|| || || | |||||||||| ||| || |||| ||| || || |||||| |
Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612
Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014
|| | |||| || |||||||||||||| || || || | ||||| || | ||| |
Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGAC 544672
Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074
|| | | ||| | | || | || || || || || || || |||||||||
Sbjct 544673 CAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGGGTTGACGACCTGGAATTCTCCA 544732
Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134
| | || | || | ||| || || ||||| ||||| | |||| || ||
Sbjct 544733 GCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCA 544792
Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194
| ||||| | || || ||||||||||| || || | | | || | | |||
Sbjct 544793 AGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCG 544852
Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254
| | |||| | || | || ||||||||||| | ||||| || |||| |
Sbjct 544853 TGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCC 544912
Query 79255 CAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGT 79314
|| | || ||||| || ||| ||| | || ||| || ||||| || ||
Sbjct 544913 CACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAAGTTTCGTATGGA 544972
Query 79315 CC---TTCCTTTTCGGCTAATTCACAAC---TCGCCTCTAATGCTCCGTAATAAATGGTT 79368
|| ||||||| || || |||| | || || || ||| || || ||
Sbjct 544973 CCAAGTTCCTTTGCGA-----TCTCAACGGATGAGGTC-AAGGCAGCGTGGTAGATAGTC 545026
Query 79369 TCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG 79427
|| ||||| | | ||||| | |||| ||||| | || |||||| | | |
Sbjct 545027 TCAAAAATTTGGATGTTGAGGTGCTTG-GCTTCGGGAGAGTCGAATGGAAGACGAAGGGC 545085
Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487
| ||| || || || | ||||||||||| | | ||||||||| || | ||| |
Sbjct 545086 CAAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GC 545144
Query 79488 AATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGA 79546
|||| ||||| ||| |||||||| || || || ||||| || || | ||| || |
Sbjct 545145 TCTTTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAA 545204
Query 79547 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC--AAAT--CGTCCATC-TATTA- 79600
| | |||| | || || | || || | ||||| || | | || || | |||
Sbjct 545205 CAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAA 545264
Query 79601 CAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 79660
|||| | ||| |||| ||| |||| |||||| || ||||||| | | | |
Sbjct 545265 CAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGT 545324
Query 79661 ATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTAC 79720
| | | || || ||||| | ||| | ||| ||||||| || | ||| ||||
Sbjct 545325 ACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTAC 545384
Query 79721 TCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATT 79780
|||| ||||| || ||||| || ||||| ||||| ||| | || || || | || | |
Sbjct 545385 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCT 545444
Query 79781 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCT--CT 79838
| | ||| | | ||| | | ||||||| || | |||| | ||| | ||
Sbjct 545445 CGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGT---CTTGCGACCCTTGCCAGCCT 545501
Query 79839 T-TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGAC 79897
| ||||| ||| | || ||||| || || |||| || | || || ||||
Sbjct 545502 TCTCGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGAC 545561
Query 79898 ATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAGAG 79955
|||| | || ||||| | | ||| ||||| | || ||| || || ||||| |||||
Sbjct 545562 ATTCATTGGGGCACATAAGGGTCCAGTCTCCGT--TCTTTTCAACACGCTTCATGAAGAG 545619
Query 79956 ATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 80014
|||||||||||| | || ||| || ||||| | | | | || || || || ||
Sbjct 545620 ATCAGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGAT 545678
Query 80015 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 80074
|||| ||||| |||||| | | || ||| | |||||| || || | ||| | || |
Sbjct 545679 TCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAA 545738
Query 80075 TAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 80134
| | || || || ||||| || || || || | ||||| |||||||| || ||||||
Sbjct 545739 AAGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTC 545798
Query 80135 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGG 80194
| ||| |||| ||| || ||||| | || ||||| |||| ||||||| ||| | |
Sbjct 545799 GGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAG 545858
Query 80195 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 80254
|||| || | ||| ||||| || || || || | || ||||| | || ||
Sbjct 545859 CACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAA 545918
Query 80255 GTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGC 80314
|| || || || || || || || || ||||| || |||||| | || || ||
Sbjct 545919 TCTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACG 545978
Query 80315 TAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 80373
||| | || ||| | | || |||||| || | || || || || || |||||
Sbjct 545979 AAGAAAGTT-GTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAG 546037
Query 80374 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAAT 80432
| || | |||| || |||||| |||||||| || || ||||| || | |||||
Sbjct 546038 TACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAAT 546096
Query 80433 TCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 80492
|| ||||| |||||||| | ||| || || || | ||| | | ||| || |
Sbjct 546097 ACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACG 546156
Query 80493 CAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGT 80550
| | ||| ||| || | ||| || ||||| || || | ||| ||||| |||||
Sbjct 546157 TAGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTCGA 546214
Query 80551 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATA 80610
||||| | ||| | |||||||||| || | || | | |||| |||| || || |
Sbjct 546215 TCGTAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCA-AATGTTT 546272
Query 80611 CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA-ATAAATCC 80667
||| ||| || ||||| || | |||||| | || || ||| |||| |||||||
Sbjct 546273 CTTTGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATA-TTGATATAAATCG 546331
Query 80668 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727
|| || | | ||| |||| || |||| |||||| || || || || || || | |
Sbjct 546332 CGGATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACGG 546391
Query 80728 GCGGCTAAAATGGCATAATCTGGATGT 80754
|| |||| ||| |||||||| ||||||
Sbjct 546392 GCAGCTAGAATAGCATAATCGGGATGT 546418
>seq23
Length=743066
Score = 123 bits (136), Expect = 4e-23
Identities = 337/513 (66%), Gaps = 5/513 (1%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| || || || | || ||||| || || || || || |||| || |||||
Sbjct 463101 TTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTC 463160
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||| || || || |||| | | || | ||| | |||| | |
Sbjct 463161 TCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAGGAGG 463220
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
| | ||| || || || || || ||| ||||| | | |||||||| | ||
Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280
Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908
| |||||||||| | || | ||||||||| || || ||| || || || || | |
Sbjct 463281 GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGACA 463340
Query 49909 GATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967
| ||||| || ||| | || | |||| | ||| || | | ||||| ||
Sbjct 463341 TCTTGAACGGATTGCTTGGATGGGCG-ATGCTTGAGATGGGAGAAGAGGAGGCATGCAAA 463399
Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027
|| ||| || || ||||| | || ||||||||||| || |||||||| | |||
Sbjct 463400 GTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCAT 463459
Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087
|| |||||||| |||||||| || ||||| || || || || || ||||| || |||||
Sbjct 463460 GAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTTC 463519
Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTT 50144
|| ||||| || || || || | | || || | | |||| || ||||| ||
Sbjct 463520 AACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCATTT 463579
Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177
|||||| ||||||||||| || | |||||
Sbjct 463580 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 463612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718261204307440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |