Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq29 311 1e-79 seq23 123 4e-23 >seq29 Length=608615 Score = 311 bits (344), Expect = 1e-79 Identities = 1330/2067 (64%), Gaps = 51/2067 (2%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 || |||||||| || || || || | | ||||| | |||||||||||| || || | | Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | |||| || ||||||||| || | ||| | |||||| || Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCTTTCATG 544492 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || || |||||||||||| |||||| ||||| || || | || |||||||||| | Sbjct 544493 TGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACA 544552 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || || | |||||||||| ||| || |||| ||| || || |||||| | Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | |||| || |||||||||||||| || || || | ||||| || | ||| | Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGAC 544672 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | | ||| | | || | || || || || || || || ||||||||| Sbjct 544673 CAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGGGTTGACGACCTGGAATTCTCCA 544732 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | || | || | ||| || || ||||| ||||| | |||| || || Sbjct 544733 GCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCA 544792 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | ||||| | || || ||||||||||| || || | | | || | | ||| Sbjct 544793 AGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCG 544852 Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254 | | |||| | || | || ||||||||||| | ||||| || |||| | Sbjct 544853 TGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCC 544912 Query 79255 CAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGT 79314 || | || ||||| || ||| ||| | || ||| || ||||| || || Sbjct 544913 CACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAAGTTTCGTATGGA 544972 Query 79315 CC---TTCCTTTTCGGCTAATTCACAAC---TCGCCTCTAATGCTCCGTAATAAATGGTT 79368 || ||||||| || || |||| | || || || ||| || || || Sbjct 544973 CCAAGTTCCTTTGCGA-----TCTCAACGGATGAGGTC-AAGGCAGCGTGGTAGATAGTC 545026 Query 79369 TCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG 79427 || ||||| | | ||||| | |||| ||||| | || |||||| | | | Sbjct 545027 TCAAAAATTTGGATGTTGAGGTGCTTG-GCTTCGGGAGAGTCGAATGGAAGACGAAGGGC 545085 Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487 | ||| || || || | ||||||||||| | | ||||||||| || | ||| | Sbjct 545086 CAAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GC 545144 Query 79488 AATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGA 79546 |||| ||||| ||| |||||||| || || || ||||| || || | ||| || | Sbjct 545145 TCTTTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAA 545204 Query 79547 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC--AAAT--CGTCCATC-TATTA- 79600 | | |||| | || || | || || | ||||| || | | || || | ||| Sbjct 545205 CAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAA 545264 Query 79601 CAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 79660 |||| | ||| |||| ||| |||| |||||| || ||||||| | | | | Sbjct 545265 CAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGT 545324 Query 79661 ATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTAC 79720 | | | || || ||||| | ||| | ||| ||||||| || | ||| |||| Sbjct 545325 ACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTAC 545384 Query 79721 TCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATT 79780 |||| ||||| || ||||| || ||||| ||||| ||| | || || || | || | | Sbjct 545385 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCT 545444 Query 79781 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCT--CT 79838 | | ||| | | ||| | | ||||||| || | |||| | ||| | || Sbjct 545445 CGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGT---CTTGCGACCCTTGCCAGCCT 545501 Query 79839 T-TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGAC 79897 | ||||| ||| | || ||||| || || |||| || | || || |||| Sbjct 545502 TCTCGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGAC 545561 Query 79898 ATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAGAG 79955 |||| | || ||||| | | ||| ||||| | || ||| || || ||||| ||||| Sbjct 545562 ATTCATTGGGGCACATAAGGGTCCAGTCTCCGT--TCTTTTCAACACGCTTCATGAAGAG 545619 Query 79956 ATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 80014 |||||||||||| | || ||| || ||||| | | | | || || || || || Sbjct 545620 ATCAGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGAT 545678 Query 80015 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 80074 |||| ||||| |||||| | | || ||| | |||||| || || | ||| | || | Sbjct 545679 TCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAA 545738 Query 80075 TAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 80134 | | || || || ||||| || || || || | ||||| |||||||| || |||||| Sbjct 545739 AAGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTC 545798 Query 80135 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGG 80194 | ||| |||| ||| || ||||| | || ||||| |||| ||||||| ||| | | Sbjct 545799 GGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAG 545858 Query 80195 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 80254 |||| || | ||| ||||| || || || || | || ||||| | || || Sbjct 545859 CACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAA 545918 Query 80255 GTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGC 80314 || || || || || || || || || ||||| || |||||| | || || || Sbjct 545919 TCTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACG 545978 Query 80315 TAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 80373 ||| | || ||| | | || |||||| || | || || || || || ||||| Sbjct 545979 AAGAAAGTT-GTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAG 546037 Query 80374 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAAT 80432 | || | |||| || |||||| |||||||| || || ||||| || | ||||| Sbjct 546038 TACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAAT 546096 Query 80433 TCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 80492 || ||||| |||||||| | ||| || || || | ||| | | ||| || | Sbjct 546097 ACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACG 546156 Query 80493 CAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGT 80550 | | ||| ||| || | ||| || ||||| || || | ||| ||||| ||||| Sbjct 546157 TAGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTCGA 546214 Query 80551 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATA 80610 ||||| | ||| | |||||||||| || | || | | |||| |||| || || | Sbjct 546215 TCGTAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCA-AATGTTT 546272 Query 80611 CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA-ATAAATCC 80667 ||| ||| || ||||| || | |||||| | || || ||| |||| ||||||| Sbjct 546273 CTTTGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATA-TTGATATAAATCG 546331 Query 80668 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727 || || | | ||| |||| || |||| |||||| || || || || || || | | Sbjct 546332 CGGATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACGG 546391 Query 80728 GCGGCTAAAATGGCATAATCTGGATGT 80754 || |||| ||| |||||||| |||||| Sbjct 546392 GCAGCTAGAATAGCATAATCGGGATGT 546418 >seq23 Length=743066 Score = 123 bits (136), Expect = 4e-23 Identities = 337/513 (66%), Gaps = 5/513 (1%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| || || || | || ||||| || || || || || |||| || ||||| Sbjct 463101 TTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTC 463160 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| || || || |||| | | || | ||| | |||| | | Sbjct 463161 TCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAGGAGG 463220 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | | ||| || || || || || ||| ||||| | | |||||||| | || Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 | |||||||||| | || | ||||||||| || || ||| || || || || | | Sbjct 463281 GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGACA 463340 Query 49909 GATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967 | ||||| || ||| | || | |||| | ||| || | | ||||| || Sbjct 463341 TCTTGAACGGATTGCTTGGATGGGCG-ATGCTTGAGATGGGAGAAGAGGAGGCATGCAAA 463399 Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027 || ||| || || ||||| | || ||||||||||| || |||||||| | ||| Sbjct 463400 GTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCAT 463459 Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087 || |||||||| |||||||| || ||||| || || || || || ||||| || ||||| Sbjct 463460 GAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTTC 463519 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTT 50144 || ||||| || || || || | | || || | | |||| || ||||| || Sbjct 463520 AACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCATTT 463579 Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 |||||| ||||||||||| || | ||||| Sbjct 463580 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 463612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261204307440