Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq29 237 2e-57
>seq29
Length=608615
Score = 237 bits (262), Expect = 2e-57
Identities = 876/1344 (65%), Gaps = 34/1344 (3%)
Strand=Plus/Plus
Query 71514 AAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAAT 71573
||| || || || | |||||||| || | | ||||||||| ||| | ||| | |
Sbjct 545089 AAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GCTCT 545147
Query 71574 TTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTA 71632
||| ||||| ||| |||||||| || || || ||||| || || | |||||| || |
Sbjct 545148 TTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAACAA 545207
Query 71633 TTACTTTGACCACATCCTTTAGTTTGAGAAAATC--AAATCTCC-CATCTATTACAA-AC 71688
|||| | || || | || || | ||||| || | || ||| || || |
Sbjct 545208 CAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAACAA 545267
Query 71689 ACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATT 71746
| ||| ||| || | ||| |||| |||||| || ||||||| | | | || |
Sbjct 545268 AAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGTACT 545327
Query 71747 GTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 71806
| || || ||||| | || | || ||||||| || | ||| |||||||
Sbjct 545328 CAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTACTCT 545387
Query 71807 TTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTA 71866
| ||||| || ||||| || ||||| || || ||| | || || || | || | || |
Sbjct 545388 TCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCTCGA 545447
Query 71867 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCT--CTT-T 71923
||| | | ||| | | ||||||| || | |||| | ||| | ||| |
Sbjct 545448 GAATAGAGTACCAAAGCTTTTGAGCCTTAATGGT---CTTGCGACCCTTGCCAGCCTTCT 545504
Query 71924 CGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATT 71983
|||| ||| | || ||||| || || || | | | || || |||||||
Sbjct 545505 CGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGACATT 545564
Query 71984 CATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAGATC 72041
|||| || ||||| | | ||| ||||| | || ||| || || ||||| ||||||||
Sbjct 545565 CATTGGGGCACATAAGGGTCCAGTCTCCGT--TCTTTTCAACACGCTTCATGAAGAGATC 545622
Query 72042 AGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 72100
||||||||| | || ||| || ||||| | | | | || || || || |||||
Sbjct 545623 AGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGATTCT 545681
Query 72101 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 72160
| ||||| |||||| | | || ||| | |||||| || || | ||| | || | |
Sbjct 545682 TGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAG 545741
Query 72161 CTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 72220
| || || || ||||| || || || || | ||||| |||||||| || |||||| |
Sbjct 545742 CACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGA 545801
Query 72221 ACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 72280
||| |||| ||| || ||||| || ||||| |||| ||||||| ||| | ||||
Sbjct 545802 GCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCAC 545861
Query 72281 GAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 72340
| || || ||| ||||| || || || || | || ||||| | || || |
Sbjct 545862 GGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCT 545921
Query 72341 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 72400
| || || || || || || || |||||||| || |||||| | || || || ||
Sbjct 545922 TCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAG 545981
Query 72401 ACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 72459
| | || ||| | | || |||||| || | || || || || || ||||| |
Sbjct 545982 AAAGTT-GTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGTAC 546040
Query 72460 TTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCC 72518
|| | |||| || |||||| |||||||| || || ||||| || | || || ||
Sbjct 546041 TTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAATACC 546099
Query 72519 TACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 72578
||||| |||||||| | ||| || || || | ||| | | ||| || | |
Sbjct 546100 AACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACGTAG 546159
Query 72579 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 72636
| ||| ||| || | ||| || ||||| || || | ||| ||||| ||||| |||
Sbjct 546160 AAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTCGATCG 546217
Query 72637 TAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT 72696
|| | ||| | || ||||||| || | || | | |||| | || || || | |||
Sbjct 546218 TAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCA-AATGTTTCTT 546275
Query 72697 --GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA-ATAAATCCTCC 72753
||| || ||||| || | |||||| | || || ||| |||| |||||||
Sbjct 546276 TGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATA-TTGATATAAATCGCGG 546334
Query 72754 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 72813
|| || | | ||| |||| || |||| |||||| || || || || || || | |||
Sbjct 546335 ATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACGGGCA 546394
Query 72814 GCTAGAATGGCATAATCTGGATGT 72837
|||||||| |||||||| ||||||
Sbjct 546395 GCTAGAATAGCATAATCGGGATGT 546418
Score = 116 bits (128), Expect = 5e-21
Identities = 195/279 (70%), Gaps = 5/279 (2%)
Strand=Plus/Plus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
||||| ||||| || | || || || | ||||| | ||||||||| || || || | |
Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919
|| | |||| || |||||||||| || | ||| || | ||||||| ||
Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTG-TAGGATCTTTCAT 544491
Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979
|||||| ||||| || ||| |||||| ||||| || || | || |||||||||| |
Sbjct 544492 GTGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAAC 544551
Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039
|| || || | |||||||||| ||| || |||| ||| || || ||||||
Sbjct 544552 AATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAAT 544611
Query 71040 GTTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075
||| | |||| || |||||||||||||| ||||| ||
Sbjct 544612 GTTGGGGATATTTTGGATGGATCCACCATCAGCAATGAT 544650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671132102702960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |