Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq29 237 2e-57 >seq29 Length=608615 Score = 237 bits (262), Expect = 2e-57 Identities = 876/1344 (65%), Gaps = 34/1344 (3%) Strand=Plus/Plus Query 71514 AAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAAT 71573 ||| || || || | |||||||| || | | ||||||||| ||| | ||| | | Sbjct 545089 AAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GCTCT 545147 Query 71574 TTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTA 71632 ||| ||||| ||| |||||||| || || || ||||| || || | |||||| || | Sbjct 545148 TTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAACAA 545207 Query 71633 TTACTTTGACCACATCCTTTAGTTTGAGAAAATC--AAATCTCC-CATCTATTACAA-AC 71688 |||| | || || | || || | ||||| || | || ||| || || | Sbjct 545208 CAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAACAA 545267 Query 71689 ACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATT 71746 | ||| ||| || | ||| |||| |||||| || ||||||| | | | || | Sbjct 545268 AAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGTACT 545327 Query 71747 GTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 71806 | || || ||||| | || | || ||||||| || | ||| ||||||| Sbjct 545328 CAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTACTCT 545387 Query 71807 TTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTA 71866 | ||||| || ||||| || ||||| || || ||| | || || || | || | || | Sbjct 545388 TCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCTCGA 545447 Query 71867 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCT--CTT-T 71923 ||| | | ||| | | ||||||| || | |||| | ||| | ||| | Sbjct 545448 GAATAGAGTACCAAAGCTTTTGAGCCTTAATGGT---CTTGCGACCCTTGCCAGCCTTCT 545504 Query 71924 CGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATT 71983 |||| ||| | || ||||| || || || | | | || || ||||||| Sbjct 545505 CGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGACATT 545564 Query 71984 CATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAGATC 72041 |||| || ||||| | | ||| ||||| | || ||| || || ||||| |||||||| Sbjct 545565 CATTGGGGCACATAAGGGTCCAGTCTCCGT--TCTTTTCAACACGCTTCATGAAGAGATC 545622 Query 72042 AGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 72100 ||||||||| | || ||| || ||||| | | | | || || || || ||||| Sbjct 545623 AGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGATTCT 545681 Query 72101 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 72160 | ||||| |||||| | | || ||| | |||||| || || | ||| | || | | Sbjct 545682 TGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAG 545741 Query 72161 CTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 72220 | || || || ||||| || || || || | ||||| |||||||| || |||||| | Sbjct 545742 CACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGA 545801 Query 72221 ACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 72280 ||| |||| ||| || ||||| || ||||| |||| ||||||| ||| | |||| Sbjct 545802 GCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCAC 545861 Query 72281 GAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 72340 | || || ||| ||||| || || || || | || ||||| | || || | Sbjct 545862 GGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCT 545921 Query 72341 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 72400 | || || || || || || || |||||||| || |||||| | || || || || Sbjct 545922 TCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAG 545981 Query 72401 ACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 72459 | | || ||| | | || |||||| || | || || || || || ||||| | Sbjct 545982 AAAGTT-GTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGTAC 546040 Query 72460 TTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCC 72518 || | |||| || |||||| |||||||| || || ||||| || | || || || Sbjct 546041 TTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAATACC 546099 Query 72519 TACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 72578 ||||| |||||||| | ||| || || || | ||| | | ||| || | | Sbjct 546100 AACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACGTAG 546159 Query 72579 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 72636 | ||| ||| || | ||| || ||||| || || | ||| ||||| ||||| ||| Sbjct 546160 AAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTCGATCG 546217 Query 72637 TAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT 72696 || | ||| | || ||||||| || | || | | |||| | || || || | ||| Sbjct 546218 TAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCA-AATGTTTCTT 546275 Query 72697 --GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA-ATAAATCCTCC 72753 ||| || ||||| || | |||||| | || || ||| |||| ||||||| Sbjct 546276 TGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATA-TTGATATAAATCGCGG 546334 Query 72754 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 72813 || || | | ||| |||| || |||| |||||| || || || || || || | ||| Sbjct 546335 ATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACGGGCA 546394 Query 72814 GCTAGAATGGCATAATCTGGATGT 72837 |||||||| |||||||| |||||| Sbjct 546395 GCTAGAATAGCATAATCGGGATGT 546418 Score = 116 bits (128), Expect = 5e-21 Identities = 195/279 (70%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 ||||| ||||| || | || || || | ||||| | ||||||||| || || || | | Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || | |||| || |||||||||| || | ||| || | ||||||| || Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTG-TAGGATCTTTCAT 544491 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 |||||| ||||| || ||| |||||| ||||| || || | || |||||||||| | Sbjct 544492 GTGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAAC 544551 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 || || || | |||||||||| ||| || |||| ||| || || |||||| Sbjct 544552 AATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAAT 544611 Query 71040 GTTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075 ||| | |||| || |||||||||||||| ||||| || Sbjct 544612 GTTGGGGATATTTTGGATGGATCCACCATCAGCAATGAT 544650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132102702960